Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0734 |
Symbol | |
ID | 6114968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1004408 |
End bp | 1005535 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632219 |
Product | AFG1 family ATPase |
Protein accession | YP_001759124 |
Protein GI | 170725098 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCT CGCCACTTGA GCGCTATCAA TACAAGCTCA CTCAATCAGA CTTTGCCGAT GATCCTGTTC AGCGTCATAG CGTTACTCAG CTAGAACTTC TTTATCAAGC CCTTAAAGTC CCCTCTTCTC AAAAAACTTT GGGGCTCTAT CTTTGGGGCG ATGTAGGTCG CGGCAAAACC ATGTTGATGG ACCTTTTCTG TGACGCAGCT GTAGAACTGT TAGATCAGCC TCCTCTTAGG CTGCACTTTC ACCGCTTTAT GGCCCGTATA CATAAGGAGA TGATACGGGA ATCCGGCAAC ACAGACCCCT TAAAGCGAAT CGCTAAGCGT ATCGCCTCTG AAACTAGGCT TATCTGCTTT GATGAGTTTT TTGTTTCAGA TATTGGTGAT GCCATGATCT TAGGTACCCT CTTTAGCGCC CTTTTTGAGC TCGATGTGCT ACTTGTTGCA ACCTCAAATA TCCCCATTGC ACGCCTGTAT GAAAATGGCC TACAGAGACA GAGATTTGAG CCCACCATCA GATTGCTAGC GCAGCATACT CAAGAGATAC ACCTTAATGG AGAGCATGAT CACCGACTTA GGCATCTGAA CTACCATCAA ACCTATTTTC TCGAACCCAA GTCAGATTTC TCCACTCTGT TCGAACAATT AAGCTCAGAC TCTGTTAGCA GTAAGCAACC ACTAATGATC TTAGGCAGGC CCATTGAGGT TATTAAAGCC AACCAAAAAC AGGCTTGGCT CGATTTTGAC GCCCTGTGTA ATGGCCCACG CTCACAGCTA GATTATATCG AGCTAGCTAG CCGCTTTGAG GTTATCCTGC TTAGTGATAT TCCCCCCCTT GGCGGTGAAC CCAGAGGCTG GATCCGTGCC CGTGGCACAG AGGATGGTTG CCAAGCTACT CAAACGGGTG AGAGGCAACT CAATTATGCG GTAAACGACG ATCCTGCAAG GCGATTTATC AGCCTAGTCG ATGAGCTTTA CGATCAAGGA GTCGCGCTCT ACCTTAGCGC CTCAGTGGCA CTTGAGGAGC TCTATATTGG TGGAGCACTC AGCTTTGAAT TTAGACGAAC TTATAGCCGC TTAACAGAGA TGCAATCACT TGAGTATTTA AGTTTTAAAA CCCTGTAA
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Protein sequence | MSLSPLERYQ YKLTQSDFAD DPVQRHSVTQ LELLYQALKV PSSQKTLGLY LWGDVGRGKT MLMDLFCDAA VELLDQPPLR LHFHRFMARI HKEMIRESGN TDPLKRIAKR IASETRLICF DEFFVSDIGD AMILGTLFSA LFELDVLLVA TSNIPIARLY ENGLQRQRFE PTIRLLAQHT QEIHLNGEHD HRLRHLNYHQ TYFLEPKSDF STLFEQLSSD SVSSKQPLMI LGRPIEVIKA NQKQAWLDFD ALCNGPRSQL DYIELASRFE VILLSDIPPL GGEPRGWIRA RGTEDGCQAT QTGERQLNYA VNDDPARRFI SLVDELYDQG VALYLSASVA LEELYIGGAL SFEFRRTYSR LTEMQSLEYL SFKTL
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