Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0726 |
Symbol | |
ID | 6114960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 992603 |
End bp | 993562 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632211 |
Product | hypothetical protein |
Protein accession | YP_001759116 |
Protein GI | 170725090 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.109693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000776934 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGCGA TGCTAATACG TGTTCTCACC CTAACATTGC TAATGACCTT AGTCGGTTGC GGCGATGACA GGCCTGATCA AATTGCTAAA TATCAGCAAT TAGCAGGCCA GAGAATCGAT TCCCTCGGGC AGATGCTCGA TAACGGCCAG ATTCGTAACG CCACTTTACT TAAACAGTAC AGTGGTATTT TAGCGAAACA GCAACCGGAT ATGGCTCCCC TCTTTAATGA GCTCGCTAAA GACGCGACAC AGCAAGGACC CATGTTTACC TCTTTGGTCC GCCGCTATCA AGAGCTTGGT GATGCCAAAA ACTTCGTCGA TCTCGATCAG CAGCTAGCTG AAGCTGAAAA TATCTATCAG GCTGCCGATC CTAGCCTCTT TAACGATATG CTGTCAGATC CTCTTAACGT CGTAGCCGAT ATGTCTAACG GCGCATTAGC AAGAGTGAAC TCAATTAGCC GTGAAGCTGC GGCACTTGCC AACGGTGCGG AAGATTTTGG TGCAGGCAGC CAACTTGTAG GTAATCCAGG TTACGGCAGC TGGCAAACTG GCTCTAATGG TATGTCTTTT TGGGCTTGGT ATGGCATGTA TTCCATGTTC TCGAATGTGA TGCGTGGGCC TATCGGTTAC GATCGTTGGT CAAGCCGAAG AAACTATAGC TACTACAATG ATGTAGGGCG TTACCGCTAC ACCTCACCAA AGCAAGCTAG GGCACAGAAC AAAACCTTTG AGCGCACCAA GAAACAGTTC AGTTCCCAAG GGAAGAAATT TGACAGCCCC TACGCAAAAT CGCGTTCAGG CTCAACAAGT TTGTCCCGTC AAAGCACAAG TACACCTAAG GCTAGCTCAA CAGGTAGCAG TAGCAAAAGT GGCAGTAAGT TCCGTTCTAA CTACTCTAAG AACAGTAACT TCCGCAATTC TAACAGTCGC ACTACTCGCG GTGTACGCCG AGGAAAATAG
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Protein sequence | MAAMLIRVLT LTLLMTLVGC GDDRPDQIAK YQQLAGQRID SLGQMLDNGQ IRNATLLKQY SGILAKQQPD MAPLFNELAK DATQQGPMFT SLVRRYQELG DAKNFVDLDQ QLAEAENIYQ AADPSLFNDM LSDPLNVVAD MSNGALARVN SISREAAALA NGAEDFGAGS QLVGNPGYGS WQTGSNGMSF WAWYGMYSMF SNVMRGPIGY DRWSSRRNYS YYNDVGRYRY TSPKQARAQN KTFERTKKQF SSQGKKFDSP YAKSRSGSTS LSRQSTSTPK ASSTGSSSKS GSKFRSNYSK NSNFRNSNSR TTRGVRRGK
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