| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0719 |
|---|
| Symbol | |
|---|
| ID | 6114953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 986533 |
|---|
| End bp | 987345 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641632204 |
|---|
| Product | Ion transport 2 domain-containing protein |
|---|
| Protein accession | YP_001759109 |
|---|
| Protein GI | 170725083 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000693847 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000252906 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA GAAAAAAATG GTTACCCCAA ACAGAAGAGG AGCTGACCCC TTTTCAGCTT
GCCATGATGG CGCTTTCACT CCTTTCTGTC ATCGTGGTGC TGGTACTGAG CTTTGCAAAG
TTAGAACCAG AAACAAAACG CTTACTCACC GCCGTTGACT TCAGCATCTG TATTATCTTC
CTCACTTACT TCTTTTATGG CTTAGCCCGA GCCGATGACA AAGTCTATTA TATTAAACAT
AACTGGATAG ACTTTGTTGC CAGCATTCCG GTCATTGAAC CACTTAGGTT TGCGAGGCTA
TTTCAGATCT TACGTGTAAT ACGCCTTATT CGCATGGCAC AGTCCTTTAT CGTGCCTATG
GTTAAACAGC GCAGACAAGC GACCCTAGCC AGCCTACTCG TTGCCATGGT GACCATATTA
ACCTTCTCAT CAGTCTTGAT TTTGATCGTA GAGAGTGGCG TCCCTGATGC CAATATACAA
ACGGCTGAGA ACGCCATTTG GTGGGCATTA GTCACCATAT CTACCGTGGG ATACGGTGAT
TACTATCCAG TGACCACGGC TGGACATGTA ATTGGCGGCA TTGTGATCAT CTGTGGGGTC
AGCTTCTTCG GTGTGATCTC AGGTTACATG GCTTCGCTCT TTATCGCCCC CGATGAGTCG
GAAAAGATTG AAGCTCAGAG CAAAGAGATC CGCACTGAAC TCCATGATGC TTTAGAGAGA
ATGGAGGCCA ATCAAGGGAT GTTGCTCAAG CAGATAGATG AGCTACAACA AGAACTCAAA
CAGGAGCGAA GTAGCTCTGG TAAATCAAGC TAA
|
|---|
| Protein sequence | MAERKKWLPQ TEEELTPFQL AMMALSLLSV IVVLVLSFAK LEPETKRLLT AVDFSICIIF
LTYFFYGLAR ADDKVYYIKH NWIDFVASIP VIEPLRFARL FQILRVIRLI RMAQSFIVPM
VKQRRQATLA SLLVAMVTIL TFSSVLILIV ESGVPDANIQ TAENAIWWAL VTISTVGYGD
YYPVTTAGHV IGGIVIICGV SFFGVISGYM ASLFIAPDES EKIEAQSKEI RTELHDALER
MEANQGMLLK QIDELQQELK QERSSSGKSS
|
|---|
| |