Gene Swoo_0715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0715 
Symbol 
ID6114949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp981962 
End bp982537 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content48% 
IMG OID641632200 
ProductSH3 type 3 domain-containing protein 
Protein accessionYP_001759105 
Protein GI170725079 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000965232 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000117044 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGTTAAGAA TCCTTGCTCT AGTGGGACTG ATGTTACTCT CCCCAAGCCT TTTGGCTGCA 
GGCCAAACCC GTTATATCTC AGATGAAGTT TACCTCTTTC TACATGGTGG TCCCGGTACG
CAGTTCCGTA TCTTAGGCAG TGTCGAAGCA GGGCAAGAGA TCACAGTATT AGGTGAGAAG
CAGGGAAACT ACTCTAAAAT CATCGATCAC AAAGGCCGTG AAGGTTGGGT TGAGACTAAG
ATGATCAGTG CTCAAAAAAG CTTACGAGTT CAGTTACCAG AAGTACAAGC AGAACTCACC
AAAACGAAAG CTGAGCTAGA ACAGGTCGTC AACTCCAGTG ACAGCAATGT GCAAGAGCTT
CGTCAAGTTA AGGCACAGCT CGCTCGTGCA GAGGAATCAC TCGAGCAAGC CAGTACTGAG
CGCGACAGAG CGACTCGCGA GCTGGCCAAC ATACAGAAAA ATGAGCGTTT TCAGATGTGG
CAAGAGGGTG GCATCATTGC CGCAGCCGGT TTGCTTATGG GCATCATCTT AGTCTACCTA
CCTAGACCAA GACGCAAAAA GAGAAGTAAC TGGTAA
 
Protein sequence
MLRILALVGL MLLSPSLLAA GQTRYISDEV YLFLHGGPGT QFRILGSVEA GQEITVLGEK 
QGNYSKIIDH KGREGWVETK MISAQKSLRV QLPEVQAELT KTKAELEQVV NSSDSNVQEL
RQVKAQLARA EESLEQASTE RDRATRELAN IQKNERFQMW QEGGIIAAAG LLMGIILVYL
PRPRRKKRSN W