| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0711 |
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| Symbol | |
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| ID | 6114945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 974250 |
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| End bp | 976025 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632196 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_001759101 |
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| Protein GI | 170725075 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.870452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000168867 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGTGT TGTTTCCTTT TTTAAAGCTA TTCAAGCACC AGTGGTTGAT GATGTTTACT
GGCCTGCTTC TCAGTGTTGT GACCTTGATG GCGGGCATAG GTTTATTGTC GCTTTCAGGC
TGGTTTCTCT CGGCCGCTGC GGTGGCGGGC CTATCGGCTG CCACTGCCAT GATGTTTAAC
TATTTTACCC CCGCAGGTGG CGTGCGGTTT CTCTCTATTG CGCGCACGGC GAGTCGTTAT
GGTGAACGAT TAGCTACCCA TGAGGCGACG TTTAAGCTGC TAACTCAGTT GAGAAGCTGG
GCGTGGCGTA AGTTGCTGCC CTTAAGCGCT GAAAACTTAC AGGGATTGAG ACAGGGAGAT
CTGCTAAATC GCTTAGTCGC AGATATTGAT ACTTTAGATC ATCTCTATCT GAGGTTAATC
ACGCCAATGG CGGCGTCATT GATCATGCTT GTGGTGCTCT ACTTTTTTGT GGCCTGGTTC
GATACCGATT TAGCGCTTAT TTTGAGCGGC ACCTTACTGG CCGTATGGGG GCTACTGCCA
CTGGTTTTTT ACCATTTAGG CCGAAGACCA GGTGTTGAAC TGCTTGAGAA TAAACGTCAA
TTACGGGTGT TGTTACTTGA GTTTATTCAG GGGCAGGCGG AGATCAGCCT ATTTGGCGCA
ACCGATAGAT TTAGAGCCGA GTTAGCGGCA TCAGAGCAGG CGCTATTTAG TAATCAATCT
GCGATGGCCA GTGTGACGGC TTTAAGTCAA GCCATGTTGG TGTTGTGTCA TGGCGTTGCT
GTGGTGTTGG TATTTTATGT GGCTACAGCG GGTGTAGGTG AACATGTTCC ACCTGGGCCT
ATTCTGGCCA CTATGGTATT TATGACCATG GCCTGTATTG AGATGTTGAT GCCGATAGCT
GGTGCATTCC AGCACCTCTC CTCTTGTGTC TCTGCTGCGA CGCGAGTAAA TGAGCTTTTG
GATCAAGAGC CAGGGATCAG TTTTAACACT GATAGCGAGC TTAAGATCAC GCAAGGTGAA
CTTAAGCTCT CCGATCTCTC CTTTAGCTAT GATGGCGAGC ATCAGGTGCT GAGCCGATTA
AGCCTCTGTA TTAAAGCCGG TGAAAAGGTG GCTTTGTTAG GTCAAACTGG CTGTGGTAAG
TCGAGCCTGC TCTCTTTGAT AGCGCGTGAG TGGGAGGCTC AAGAGGGGGA GATCAGTATC
GATGGTGAGC GGTTAGACCG TTACAGCGAG TCGTCACTCA GAGAGGGGAT AACCTTAGTG
AGTCAGCGCA TCTATCTGTT TGCAGGCACC TTGAGAAGTA ATCTCATTTT GGCCCAAGCT
GAGGTTGAAC CTTTAGCCAC AAGAGCCTTG AGACGCGAGG CGCAAGCGGC GAATGATGCG
ATATTGATTG AGGTGTTAAA CAGAGTAGGC CTAAGTTCGC TCACCCAAGG AGAGGCACCG
CTTGATGCTT GGATTGGTGA AGGGGGTAGA CAGTTATCCG GTGGTGAGCA GCGACGGATC
GGTGTGGCCA GAGCCCTGTT ACGTGATGCA CCTATTTTAT TACTCGATGA GCCGACTGAA
GGTTTAGATA AACGCACCGA GCGTGAAATA TTAGCCCTTC TGTTTGAATT TGCTAAAGAT
AAAACGGTAG TGATGATCAG CCACAGATTA ACGGCGATGG AGCAGATGGA CTGTATCTAT
TTGATGGAGG AGGGGGGAGT GTTAGCCCAT GGCGAGCATG ATCAGTTACT TCAAGATAGC
CCATATTATA AGAGTCTATA CCGCCAGCTG GTTTAA
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| Protein sequence | MKVLFPFLKL FKHQWLMMFT GLLLSVVTLM AGIGLLSLSG WFLSAAAVAG LSAATAMMFN
YFTPAGGVRF LSIARTASRY GERLATHEAT FKLLTQLRSW AWRKLLPLSA ENLQGLRQGD
LLNRLVADID TLDHLYLRLI TPMAASLIML VVLYFFVAWF DTDLALILSG TLLAVWGLLP
LVFYHLGRRP GVELLENKRQ LRVLLLEFIQ GQAEISLFGA TDRFRAELAA SEQALFSNQS
AMASVTALSQ AMLVLCHGVA VVLVFYVATA GVGEHVPPGP ILATMVFMTM ACIEMLMPIA
GAFQHLSSCV SAATRVNELL DQEPGISFNT DSELKITQGE LKLSDLSFSY DGEHQVLSRL
SLCIKAGEKV ALLGQTGCGK SSLLSLIARE WEAQEGEISI DGERLDRYSE SSLREGITLV
SQRIYLFAGT LRSNLILAQA EVEPLATRAL RREAQAANDA ILIEVLNRVG LSSLTQGEAP
LDAWIGEGGR QLSGGEQRRI GVARALLRDA PILLLDEPTE GLDKRTEREI LALLFEFAKD
KTVVMISHRL TAMEQMDCIY LMEEGGVLAH GEHDQLLQDS PYYKSLYRQL V
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