Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0710 |
Symbol | |
ID | 6114944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 972430 |
End bp | 974253 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632195 |
Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
Protein accession | YP_001759100 |
Protein GI | 170725074 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0156837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAT CGCTAGAGAA AGTGCTGACA TCTTGGCTAA AACAGCAGAA AGGTGCCTGT GGTTTCTACC TAAATTTAAC TGTTCTGTTT GGTTTGTTAA CTGGGCTTTC ATTGGTTGTT CAGGCCTACT TTATCGCCAC TATTTTACAT GGGGTGATTA TTCTAGAGCT GCCAAGAGAG CAGTTCAGCC ATGAGTTTTA TGCTCTGCTA GGTTTGATTT TTGTGAGAGC TTTGCTGGCT TTTGCTAGAG AGCGAGCCAG TTTTGAAGCA GGAAAGCGGT TAAGAACTCA TATTCGCTCC ATGGTACTCG ATAAGCTTAA TGAGCTAGGA CCTGCTTTTG TCAAAGGCAA ACCAGTGGGT AGCTGGGCGA GTATCGTGTT GGAGCAAGTG GAAGATCTTC ATGATTTTTA TGCCCGTTAT TTGCCACAGG TCTTACTGGC TGGCTTTATT CCTCTCACTA TTCTTGTGGT TGTGTTCCCG ATTAACTGGG CCGCTGGTGT GATCTTATTT GCCACTGCGC CGCTTATTCC TATGTTTATG ATCTTGGTTG GCATGGGGGC GGCCGATGCC AACCGTAAAA ACTTTGGTGC GCTGGCGCAG TTAAGCGGCC ACTTTATGGA CAGGCTTAAA GGCCTTAGTA CCCTAAAGCT GTTCAATCGC GGTAATGCTG AGGCCAAGGA GATAGAGTCT GCATCGGAAG AGTTTAGAGA GCGCACTATG TCTGTTCTGC GAATGGCGTT TTTAAGCTCT GCTGTGCTTG AGTTCTTTGC CGCTGTCTCT ATAGCAGTTC TGGCAGTCTA TTTTGGTTTT AGTTATCTAG ATCATCTTAA TTTTGGTGAT TATGGAGCTG GCTTGACCCT GTTTACTGGC CTGTTTGTGC TTATTTTGGC TCCAGAGTTT TATCAACCTC TGCGTGATAT GGGAACCCAC TATCATGCAA AGGCCCAAGC GATAGGGGCT GCTGAAGAGT TGATGGCACT GCTTAACTAT GAACATAAGG ATATGGGTGA TGGCGAAGGG GAAGACGCTA GCGATAGATG CAGTGAGTCC GCTCTTGGGG ATCTCTCGTT AGGGTTAAGT CTAGAAGCCT GTGAGCTAAG GGTGAGTAGC TTAGATGGTG CGCCTCTGCT GGGGCCGATA AGTTTTAGGT TAAAAGCGGG TGAGCATCTG GCTATTGTTG GTCCAAGTGG TGCGGGAAAA ACCAGTTTAC TCAATGTATT GCTGGGTTTT CTCCCCTATG AAGGCTCACT TAAGGTCAAC GGCGTTGAGT TACGTGAACT GGACAAGGGG TTATGGAGGA AGCAGCTGGC ATGGCTTGGT CAAGATCCAC AACTGTTTCA CGGGACTATT CGCGATAATG TGGCGATGGC TAATCCACAA ATGAGTGATG AGTTGGTGAG GAAAAATCTG GCTCAGGCTA AGGTGCTGGA TTTCGTTGAA CAGCAGGCCG ATGGACTCGA TTACCAAATA GGTGAGCAGG CTGCAGGCCT CTCAGTAGGC CAAGCACAGC GAATTGCGCT TGCTCGTGCT CTGGGACAAA ATGCACATCT GTATCTGCTT GATGAGCCAA CTGCCAGCTT AGATAGTCAC AGTGAACAAG CAGTACAAGA GGCGCTCACA GAGGTGATGA TTAACTCAAC TTCTTTGATG GTGACCCACA GGTTAGATCA GTTGGATAGG ATGGACACTA TTTTAGTGCT CGACAGAGGA CTGATTGCTG AGCAGGGCAG TTTTGCACAG TTGAGTCAGG CTAATGGAGT ATTTAAGCAG ATGCAGCAAG AGGCGGTGAA TCAAGCCTCA AGTGTAGAGG GAGCAAGCTC ATGA
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Protein sequence | MEKSLEKVLT SWLKQQKGAC GFYLNLTVLF GLLTGLSLVV QAYFIATILH GVIILELPRE QFSHEFYALL GLIFVRALLA FARERASFEA GKRLRTHIRS MVLDKLNELG PAFVKGKPVG SWASIVLEQV EDLHDFYARY LPQVLLAGFI PLTILVVVFP INWAAGVILF ATAPLIPMFM ILVGMGAADA NRKNFGALAQ LSGHFMDRLK GLSTLKLFNR GNAEAKEIES ASEEFRERTM SVLRMAFLSS AVLEFFAAVS IAVLAVYFGF SYLDHLNFGD YGAGLTLFTG LFVLILAPEF YQPLRDMGTH YHAKAQAIGA AEELMALLNY EHKDMGDGEG EDASDRCSES ALGDLSLGLS LEACELRVSS LDGAPLLGPI SFRLKAGEHL AIVGPSGAGK TSLLNVLLGF LPYEGSLKVN GVELRELDKG LWRKQLAWLG QDPQLFHGTI RDNVAMANPQ MSDELVRKNL AQAKVLDFVE QQADGLDYQI GEQAAGLSVG QAQRIALARA LGQNAHLYLL DEPTASLDSH SEQAVQEALT EVMINSTSLM VTHRLDQLDR MDTILVLDRG LIAEQGSFAQ LSQANGVFKQ MQQEAVNQAS SVEGASS
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