Gene Swoo_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0706 
Symbol 
ID6114940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp965714 
End bp966826 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content39% 
IMG OID641632191 
Producthypothetical protein 
Protein accessionYP_001759096 
Protein GI170725070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC AGATTGACGA CCCTATTGAA ATTGAAGCTC AAGAAGAACT TGAATTAGCT 
GTTCATCCTC ACCCTATGGG TACAGAGACT CAAATTCGAA TAGCCAAAGA GCAGTCGAGT
GTTTATGAGT TGCTTCGTAA GGAAAGTAAA GGGTTACTAG TATTAGCGCC TGCTTTTCAA
CGCATTGATG TATGGGATAA AAAACACAAG TCTGAACTGA TTGAATCCAT CTTAATGGGG
ATCCCAATAC CACTGATTTA TTTGTTTGAA GACGAATATG GGATTCGTCA AATTGTTGAT
GGTAAGCAAC GCATAACTGC GTTAAAAGAA TTTATAAATA ACTCTTTTTC ACTTTCAGAA
CTATCTATGT TACCTCAATT AAAGGGGTTG AAGTTCGAGC AGATTCCATC ACTGCTACAG
GCAAAGCTGG AAGATTATCA ACTACAAACT TATGTCATTC AGCCCCCGAC TCCAGAATCT
GTCAAATTTA ACTTGTTTGA ACGAGTTAAT CGAGGAGGAG TAAATCTAAA TAAGCAAGAG
ATGCGGCATG CACTCTATCA AGGGAGAGCC ACGGTTCTTT TGGAAGAACT TGCAATGAGT
CAAGAGTTTC AACTAGCAAC AGGATTCGGG GTTAAATCCA ACCGCATGCG AGATCGGTAT
CTGATATTAC GATTTATTGC TTTTTATCTC TACTTTACAA ATCAATTGCC AAATATACAG
TATCGTTTGG GTATTGATGG CTTTTTGGCA TCTGTCATGA GGTTTGTTAA TCAGGCTCCC
AAAGAGTTGA TTGAACATGT GAGGCACGTT TCCTTGTTAG GGATGAGAAA TTCGGCAATA
ATTCTTGGTG AGAATGGCGT ACGATTTGCG CCCAAAAAAC CTGGTGGAAA TAAACGCCCT
GTTAATATGG GACTGTTTGA AATGCTGATT TTTACTTTTT GCTATGTAGA TTTATCAATT
GTGAACCATC AAGAAATAAA GAGGGTTATC GAGCGACAAA AGTTTGAAAT TGATCAAATG
GATTTGCTAG CTGGCTCTAT TGACACGACA GCTAATGTCA CTGAACGCTT TAACCTTGCT
CAACAGTTAA TTCAGAGAGC TAAGTATGCT TAA
 
Protein sequence
MTEQIDDPIE IEAQEELELA VHPHPMGTET QIRIAKEQSS VYELLRKESK GLLVLAPAFQ 
RIDVWDKKHK SELIESILMG IPIPLIYLFE DEYGIRQIVD GKQRITALKE FINNSFSLSE
LSMLPQLKGL KFEQIPSLLQ AKLEDYQLQT YVIQPPTPES VKFNLFERVN RGGVNLNKQE
MRHALYQGRA TVLLEELAMS QEFQLATGFG VKSNRMRDRY LILRFIAFYL YFTNQLPNIQ
YRLGIDGFLA SVMRFVNQAP KELIEHVRHV SLLGMRNSAI ILGENGVRFA PKKPGGNKRP
VNMGLFEMLI FTFCYVDLSI VNHQEIKRVI ERQKFEIDQM DLLAGSIDTT ANVTERFNLA
QQLIQRAKYA