| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0703 |
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| Symbol | |
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| ID | 6114937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 962335 |
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| End bp | 963819 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632188 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001759093 |
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| Protein GI | 170725067 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTA CCTCCCTGGG GTTATCAGCC CCAATATTAA AAGCTGTTGC CCAAAAAGGT
TACGATACTC CTTCGCCAAT TCAAGCCCAA GCCATTCCGG CTGTACTCGA AGGCAAAGAT
GTAATGGCCG CAGCTCAAAC AGGCACAGGT AAAACAGCAG GATTTACGCT ACCGCTTTTA
GAGCTGTTAA GCAGAGGAAA GCGTGCTCCA GCAAAGCAGG TTCGAGCGTT AGTGTTAACT
CCTACCCGTG AACTGGCAGC TCAAGTTGCA GAAAGCGTTG AAACGTACGG TAAAAACCTT
CCACTGCGCT CCGCCGTTAT TTTTGGTGGC GTAGGCATAG GCCCGCAGAT ATCTAAGCTA
GGTAAAGGGG TCGACATCTT AGTCGCAACA CCGGGTCGCT TACTGGACTT GTATAATCAA
GGCGCCGTTA GCTTTAAACA GCTTGAAGTG CTGGTACTCG ATGAAGCCGA CCGCATGTTA
GACATGGGCT TTATTCATGA CATTAAAAAA ATTCTTAAGA TATTGCCAGC CAAGCGCCAG
AACTTGATGT TCTCGGCCAC CTTCTCTGAT GATATCCGCA ACTTAGCTAA AGGCTTAGTG
AACAACCCAG TTGAGATATC TGTTACGCCG CGTAATGCCA CGGCTAAAAC CGTTGAGCAG
TATATCTATC CTGTAGATCA GAAACAGAAG ACTGCCGCCC TTATCCATCT GGTTAAACAG
AATGAGTGGA AACAAGTACT GGTATTTAGT CGCACTAAAC ATGGCGCTAA CCGTATTGCT
AAAAACCTTG AAGCTAGCGG CCTCACCGCA GCGGCAATCC ACGGTAATAA GAGCCAAGGT
GCCCGCACAA AAGCCTTAGC AAACTTTAAG AGTGGCGAAG TTCGCGTATT AGTTGCTACT
GATATCGCAG CTCGCGGTAT CGATATCGAT CAACTGCCGA ACGTCGTTAA CTTCGACCTA
CCTAATGTAC CTGAGGATTA CGTTCATCGT ATCGGCCGTA CAGGTCGTGC TGGCGCGAAC
GGTCAAGCAG TGTCTCTAGT TAGCGGCGAT GAGAGCAAGC TACTTAGGGA TATCGAGCGC
TTAATTAAGC AGAATATTCC CCGTAAAGAG GTTGAGGGCT TTGTGCCGAC TCAGGTTTTG
CCTGACAATG ATCTTAATAG CCAAAAGCAT GGTCAAAATC GCGGTCCGCG TAATGCAAAT
GGCAGAGGCA ATGGCCGTAA TGGCAATAGC CAGTCTCGCG GAAGTAAACA GGGACGTGGT
AGCGGTGATA CCCGCAGCGA CTCTGACAAG AATAGACGCC CACGTAGAAA CAGTGAAGGC
AAAACAGAGC ATAAAGATGG CCAACGTAGC GGCGAAGCGG CACGCGGTCA TAAGCCAAAT
GATAAGAACT CAAGCCATGG CCGCTCACGT AAACCTTCTG GCCAGAGTTC ATCTAGCTCT
CCAGCTTCTA AGCCAACATC AAATAGTAAT ATTTGGGGTA AGTAA
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| Protein sequence | MSFTSLGLSA PILKAVAQKG YDTPSPIQAQ AIPAVLEGKD VMAAAQTGTG KTAGFTLPLL
ELLSRGKRAP AKQVRALVLT PTRELAAQVA ESVETYGKNL PLRSAVIFGG VGIGPQISKL
GKGVDILVAT PGRLLDLYNQ GAVSFKQLEV LVLDEADRML DMGFIHDIKK ILKILPAKRQ
NLMFSATFSD DIRNLAKGLV NNPVEISVTP RNATAKTVEQ YIYPVDQKQK TAALIHLVKQ
NEWKQVLVFS RTKHGANRIA KNLEASGLTA AAIHGNKSQG ARTKALANFK SGEVRVLVAT
DIAARGIDID QLPNVVNFDL PNVPEDYVHR IGRTGRAGAN GQAVSLVSGD ESKLLRDIER
LIKQNIPRKE VEGFVPTQVL PDNDLNSQKH GQNRGPRNAN GRGNGRNGNS QSRGSKQGRG
SGDTRSDSDK NRRPRRNSEG KTEHKDGQRS GEAARGHKPN DKNSSHGRSR KPSGQSSSSS
PASKPTSNSN IWGK
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