| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0702 |
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| Symbol | |
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| ID | 6114936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 959395 |
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| End bp | 962241 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632187 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001759092 |
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| Protein GI | 170725066 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.861146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTGG TGACTCTGCC TGCATCTGCC GAGAGTTTGA TTCGCTTTGA TATTGATAAA
CAACGAGCCG ATAAAGCCAT TATTGAGTTT GCAAAGCGGT CTAATCAAAC AATAGTTTTT
TCGTTTGATT TAACCAAAAA ACACTATGCA AACAACCTTA ATGGTTATTA CTCGGTGACT
TCCGGTTTAA AAAAATTACT AGATGGTACC GGTCTAATCG CTGTTGTTGA TCTCTCTGGT
CTATTGAGCA TTCAAGCTGA TGAACAGGAA AGGATAAATA CAACAATGAA AAAAACAACA
ATAGCGGCTC TACTGCCCCT AGCGATAGGG ACCACAGGCC AAGTTGTACA AGCGCAAGAG
GTGGAGCAAG TTGAGGACGA GATAGAATCA ATCTCAGTGA TTGGTAGTCG TGTTCCAGGT
AGAAGTTCAA ACGAACTGCC CGTTCCCGTT GATATTTTAA CGGCCGAAGA TCTTGCAAAT
ACTGGCCAAA CGGAAGTCGG TCGTATGTTG CAGGCGATAG CCCCCTCTTT TAACTTTTCA
AGCTCTGCGA TCAGTGATGG TACCGATGCT CTGAGACCTG CGACTCTGCG TGGCTTAGGC
CCAGATCAAA CCTTGGTATT GATCAATGGT AAAAGGCGTC ATCAAGCCAG TCTTATTCAC
ATCAATACAT CGGTTGGACG AGGCACTGCA GGGACAGATA TGAATGCTAT CCCCGCATCA
GCGATTAAAC GTATTGAAGT TTTGCGTGAC GGTGCTGCGG CTCAATATGG TTCAGATGCA
ATTGCCGGTG TGATTAACAT TGTACTGAAT GATGCCGTTG ATGGCGGTAA AATTGGCGTC
TCTTACGGTG AGCATTCAGA GGGCGACGGT GAAACCACCA ATGTTGATAT CTCTAAAGGC
TTTGCCTTAG GGGAAGATGG CTACTTAGAT GCGACGTTCA ACTTTAGAGA TCGTGGTTCA
ACCAATAGGG CAGGCCTTCA TGGGTCATGC CAGTTTTCAG GTTGTACTGA TGCCGCCAAT
GGCGCGCAAC TGGCTGGCGA TCCAAGAGAG CTGACTGCGG ACAGAAACAC CTTCCGCATT
GGTGATGCAA CCTCTGAGCA GATAGGTATT GTGCTCAACA CCGGCTATGA GCTGGGTGAT
GGCGAGCTTT ATGGTTTCCT TACCTACTCA AATCGTGACA ATGAGTCTGC CGCATTCTTC
CGCCACAACA ATAACAATGG CGGTAATGCA CCACTGCAAG ATGGTGATGC CACCATTCCT
GCGGGCTTCC TGCCTAAGAT AAATTCTGAG ATCAGTGACC TTTCATATAA CTTTGGTTAT
CGGACTGATT TCGACAATGA TGCTTCGCTA GATTTGTCCT ACACCTATGG TCGAAATAAG
ATTGACTATA CAACCAGTGA CACCATCAAC TCATCTTATG CCAACTCATT AATCTATACC
TCCACAATGA CGGCCGATGA GATCCGCTCT TCGATACCTC GCGAAGGTTT TGCCTATGGG
TTAGAGCTTT CGTTGCAAAC CCTCAACTTA GATTACACAA AGCAGTATGA TCTGTTTGCC
CTAGCCATGG GAGCTGAAAT TAGAACTGAC GAGTACCGAG TGACACCGGG TGAAGAGTAC
TCATACCGTG ACTATGATAC TGACGCGATG GGGCAGAGCT TGTATGCGAC CGACCGCAGT
GCCGGTACCC AAGGTTTTGG TGGGATAGGT CCGGTTTCTG AAGTGGATGA AACCCGTGAT
GTTTTCTCTT TCTATGTAGA GTTAGAAGCT GATATTACCG ACGATCTTTT GGTCAGTGGT
GCGGCGCGTT ATGATGACTA TGAAGGCTTC GGTGACAGCA CCAACTTTAA ATTTGCGGCT
AACTGGTCAG TGACCGATGA AATCTCTCTA CGCAGTGCGG TGAGCACAGG CTTTAGAGCA
CCGTCAATGC AGCAACTTTA CTTCAATAAT ATCAGTACTC AGTTTATCAA TAACCCAGAT
CCAAATGCGC CTTCAGGTGA TCAGATAGCG GTTCAGGTGG GTACCTTTAG AAACGACAGT
GAACTGGCAA AATCAATCGG GATCCCTGAG CTTAAAGAGG AGGAGTCGAC CAACTTCAGT
ATTGGTACTG TTATCGACCT AGGTTATGAC ATCAATCTAA CGGTTGATTA CTACTCCATC
GATATTGATG ATCGTATTGT GATCAGTAAT AAACTAGGGT TTGGCTTAGA TAATAATCTA
GATAACGCAT TGACTGCGGC GGGTGCTGGA GCAGGTCAGT TCTTCCTTAA TGGGGCGGAT
ACTGAAACCA GCGGTGTCGA CATTATTGCG ACCTGGAATA CAGAAGTGTT AAGCGGAGAC
CTTAAGCTGG TTTTTGCGGC TAACTTCACT GAAACAGAGG TGGTTAATAT CTTTACTCCG
CCAAACAGTG CCTTAGATGG AATTCCACCT GAAGATATTT TCTCGCAGCA AGATATCTCC
ATTATTGAAG ATTGGCAGCC AGAAGATCGC ATCAGTTTAA CTGGATTATA TACGTTCGAT
GATCTGACTG TGAACTTAGG GTTTAACCGT TATGGCGAGT ACACAGTAAC TGACGGAGAT
AGCCAAACTT ACGGCGCAGA GATCCTCACC GATCTTCGCA TTAAATACCA AGTGACTGAC
AACTTATCAT TCAACATCGG TGGCAATAAC ATTTTTGATG TTTACCCTGA TGAGAACATG
ATTGGTAACT CGAGATCGGG AACCATTGTT GACAGCGCAG GTAATGAAAT CGTTAACAGC
CCGGGGGTAT TTACCTATTC ACGTCGTTCA GCACCATTTG GATTTAATGG GGCTTACTAC
TATGCGGGGG CTGAATACAG CTTTTAA
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| Protein sequence | MLVVTLPASA ESLIRFDIDK QRADKAIIEF AKRSNQTIVF SFDLTKKHYA NNLNGYYSVT
SGLKKLLDGT GLIAVVDLSG LLSIQADEQE RINTTMKKTT IAALLPLAIG TTGQVVQAQE
VEQVEDEIES ISVIGSRVPG RSSNELPVPV DILTAEDLAN TGQTEVGRML QAIAPSFNFS
SSAISDGTDA LRPATLRGLG PDQTLVLING KRRHQASLIH INTSVGRGTA GTDMNAIPAS
AIKRIEVLRD GAAAQYGSDA IAGVINIVLN DAVDGGKIGV SYGEHSEGDG ETTNVDISKG
FALGEDGYLD ATFNFRDRGS TNRAGLHGSC QFSGCTDAAN GAQLAGDPRE LTADRNTFRI
GDATSEQIGI VLNTGYELGD GELYGFLTYS NRDNESAAFF RHNNNNGGNA PLQDGDATIP
AGFLPKINSE ISDLSYNFGY RTDFDNDASL DLSYTYGRNK IDYTTSDTIN SSYANSLIYT
STMTADEIRS SIPREGFAYG LELSLQTLNL DYTKQYDLFA LAMGAEIRTD EYRVTPGEEY
SYRDYDTDAM GQSLYATDRS AGTQGFGGIG PVSEVDETRD VFSFYVELEA DITDDLLVSG
AARYDDYEGF GDSTNFKFAA NWSVTDEISL RSAVSTGFRA PSMQQLYFNN ISTQFINNPD
PNAPSGDQIA VQVGTFRNDS ELAKSIGIPE LKEEESTNFS IGTVIDLGYD INLTVDYYSI
DIDDRIVISN KLGFGLDNNL DNALTAAGAG AGQFFLNGAD TETSGVDIIA TWNTEVLSGD
LKLVFAANFT ETEVVNIFTP PNSALDGIPP EDIFSQQDIS IIEDWQPEDR ISLTGLYTFD
DLTVNLGFNR YGEYTVTDGD SQTYGAEILT DLRIKYQVTD NLSFNIGGNN IFDVYPDENM
IGNSRSGTIV DSAGNEIVNS PGVFTYSRRS APFGFNGAYY YAGAEYSF
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