Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0699 |
Symbol | |
ID | 6114933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 956052 |
End bp | 957434 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632184 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_001759089 |
Protein GI | 170725063 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000725469 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAC CGACAGCATT AAGTCTTATT CCACCTGTGG TGGTCCTGGT GTTAGCGATT GTGCTACGCC GTCCAATCCT TTCGTTAATT ATTGGTGCAC TAGTGGGACT CGTTATGTTC GAGCCCGAAA ACTTGCTCAC TAATTTTACC GATATCTCTC TTTCAGTGAT GGCCGATGAG ACCATTGGTT GGCTTATTCT TGTGTGTGGT GGCTTCGGTG CCCTGATCGC GTTATTGGTG AAAACCGGTG GTTCGATGGC ATTTGGTCGT CATGCCCTAA AGTTGGCCAA GGGACCCAAA TCATCACTCT TTATGACCTT TATCTTAGGT GTGGTGATCT TTATTGATGA TTACCTCAAT GCCCTGACTG TCGGCTCAAC CATGAAGCGA GTAACCGATA AGTTTAAGGT CTCTCGTGAG ATGTTGGCCT ATGTGGTGGA CTCAACGGCT GCACCAATCT GTGTGCTTGT TCCACTCTCC ACGTGGGCAG TGTTCTTCGG TGGTCTGCTG GTGGATAATG GTATTGCAAG TGAGGGACAA GGTATTGCTG TTTATATGCA AGCTATTCCT TACATGCTTT ATGCTTGGCT GGCGGTGGCT ATGGTGCTGT TAGTTATCTT AGGTATAGTG CCCGCATTTG GTCCGATGAA AAAAGCTCAG CTTGCAGCTT CTCAAGGGGA GCCTGCTTTA AAGCAGATCG ATCTCGATGA AGTACAGACC TCTGATGAAT ATGCGGTTAA AGCGATTGAG GATGAGTTTA AACACGCCGA TGAGCAGGGT AAGTTGCATA ACTTCTTCGT GCCTATTCTT CTGCTTGTTG GCTTTACTGT TTACTTTGAT ATCGATGTAT TGAAGGGGTT AGTGGCGACT TTGGCGGTTA CTTTACCTTA TTATGGTTTG CAAAAGCTGA TGCCACTGTC TGAGATGATG GAGCAGATGA TCGATGGCTT TAAAAATATG TTGCCAGCGA TCGGGACTGT GATCGCGGCA TTTATCTTTA AAGATGTGTG CGATAAATTG ATGCTACCTC AGTATGTGAT CGATACGCTA AGTCCATTTA TGACACCAGA CCTGTTGCCT GCTGTCGTGT TCTTGAGTAT GTCTATTTTG GCATTTGCAA CTGGATCAAG CTGGGGGATT TTTGCGGTTT CTATCCCTAT CGTGATGCCA TTGGCCCAAT CGGTTGATGC CAATATTCCA TTGGTGATAG GTGCACTGTT ATCTGCTTCA TCTTTCGGTA GTCAGGCTTG TTTCTATTCT GACTCCACTG TATTGGCCGC TCAAGGCTCA GGCTGTAACT TAGTGAGTCA TGCCGTGACT CAGTTGCCAT ATGCCTTAAT TGCAGCAGCA GTCACCTTTG TGGGCTTCCT GTTGCTGGCA TAA
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Protein sequence | MSEPTALSLI PPVVVLVLAI VLRRPILSLI IGALVGLVMF EPENLLTNFT DISLSVMADE TIGWLILVCG GFGALIALLV KTGGSMAFGR HALKLAKGPK SSLFMTFILG VVIFIDDYLN ALTVGSTMKR VTDKFKVSRE MLAYVVDSTA APICVLVPLS TWAVFFGGLL VDNGIASEGQ GIAVYMQAIP YMLYAWLAVA MVLLVILGIV PAFGPMKKAQ LAASQGEPAL KQIDLDEVQT SDEYAVKAIE DEFKHADEQG KLHNFFVPIL LLVGFTVYFD IDVLKGLVAT LAVTLPYYGL QKLMPLSEMM EQMIDGFKNM LPAIGTVIAA FIFKDVCDKL MLPQYVIDTL SPFMTPDLLP AVVFLSMSIL AFATGSSWGI FAVSIPIVMP LAQSVDANIP LVIGALLSAS SFGSQACFYS DSTVLAAQGS GCNLVSHAVT QLPYALIAAA VTFVGFLLLA
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