Gene Swoo_0691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0691 
Symbol 
ID6114925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp946527 
End bp947435 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content40% 
IMG OID641632176 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_001759081 
Protein GI170725055 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACA TTAATACTGT GAAAAAATTA CCTTATATAT ATCAAGATAT AACAGCAAAA 
AACGCCAATT CATTACTCGT GGTCACAGCC GCTGTTCACG GTAATGAACT GGTTGGCCTT
AAGGCGATAG ATGCTTTAAG TAACATAGCA TCCAAAATAC CTTTAAAGGG GAGAATCGTC
GTCATTCATG GGAACCCAGA AGCCACAGTT CAAGAAGTGC GTTATGTTGA CCAAGACTTT
AATCGCGCTT TTACGGCGAC AAATCTTATC TCTGAGCCTA CAAATCACGA GTTAGTCTCA
GCACAACATC TAAGCCAACT AATGCTAAAT TTGCTCGATG AGCAAGCTTC AAATGTCGCT
AAGCATCTAC TCGATATTCA CTCAATGTCA TCAACTGGCA CTCCGTTTAT GTCCTTTGTT
GCAGACAAAC CACCACAACT AATTATTGAA CAAACTCCCA TACCTGTAAT TGAGGGGATA
ATTGATAGTT TAGAGGGGTG TTTAGCTAAA TGGTTTGCAC CCTATTTTAA TAGCAGCCAT
ATCGTTGAAT GTGGTCAGCA CCAAGAGCAA TCTACTTTTG ATTTTGGATT TCATACCTTA
ATCTATCATC TATATCTATT TGATATGCTA GAAGATTGCA AACAAGTACA GCAAGCATTC
GACTATCTAT CCTGCCACAC ACATCCCTAC TCATACTTAA AAACCAACAT CTGTTATCGT
CAGGCGGTCA ACAAAGATCA GATATTTGAG ATGCAACCGG GATTTGTTAA TCTTCAGCAA
GTTAACGCGG GCCAGTTATT GGCTAAAATA TCGGGCAAAA AAGTTCTAGC GCCCTTTGAT
GGCCGAGTAA TTTTGCCCTG TTATCAAAGG CAATGCGAAG AGGGCTATTT TATAAGCCAA
GATAGGTAA
 
Protein sequence
MAYINTVKKL PYIYQDITAK NANSLLVVTA AVHGNELVGL KAIDALSNIA SKIPLKGRIV 
VIHGNPEATV QEVRYVDQDF NRAFTATNLI SEPTNHELVS AQHLSQLMLN LLDEQASNVA
KHLLDIHSMS STGTPFMSFV ADKPPQLIIE QTPIPVIEGI IDSLEGCLAK WFAPYFNSSH
IVECGQHQEQ STFDFGFHTL IYHLYLFDML EDCKQVQQAF DYLSCHTHPY SYLKTNICYR
QAVNKDQIFE MQPGFVNLQQ VNAGQLLAKI SGKKVLAPFD GRVILPCYQR QCEEGYFISQ
DR