Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0691 |
Symbol | |
ID | 6114925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 946527 |
End bp | 947435 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641632176 |
Product | succinylglutamate desuccinylase/aspartoacylase |
Protein accession | YP_001759081 |
Protein GI | 170725055 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2988] Succinylglutamate desuccinylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTACA TTAATACTGT GAAAAAATTA CCTTATATAT ATCAAGATAT AACAGCAAAA AACGCCAATT CATTACTCGT GGTCACAGCC GCTGTTCACG GTAATGAACT GGTTGGCCTT AAGGCGATAG ATGCTTTAAG TAACATAGCA TCCAAAATAC CTTTAAAGGG GAGAATCGTC GTCATTCATG GGAACCCAGA AGCCACAGTT CAAGAAGTGC GTTATGTTGA CCAAGACTTT AATCGCGCTT TTACGGCGAC AAATCTTATC TCTGAGCCTA CAAATCACGA GTTAGTCTCA GCACAACATC TAAGCCAACT AATGCTAAAT TTGCTCGATG AGCAAGCTTC AAATGTCGCT AAGCATCTAC TCGATATTCA CTCAATGTCA TCAACTGGCA CTCCGTTTAT GTCCTTTGTT GCAGACAAAC CACCACAACT AATTATTGAA CAAACTCCCA TACCTGTAAT TGAGGGGATA ATTGATAGTT TAGAGGGGTG TTTAGCTAAA TGGTTTGCAC CCTATTTTAA TAGCAGCCAT ATCGTTGAAT GTGGTCAGCA CCAAGAGCAA TCTACTTTTG ATTTTGGATT TCATACCTTA ATCTATCATC TATATCTATT TGATATGCTA GAAGATTGCA AACAAGTACA GCAAGCATTC GACTATCTAT CCTGCCACAC ACATCCCTAC TCATACTTAA AAACCAACAT CTGTTATCGT CAGGCGGTCA ACAAAGATCA GATATTTGAG ATGCAACCGG GATTTGTTAA TCTTCAGCAA GTTAACGCGG GCCAGTTATT GGCTAAAATA TCGGGCAAAA AAGTTCTAGC GCCCTTTGAT GGCCGAGTAA TTTTGCCCTG TTATCAAAGG CAATGCGAAG AGGGCTATTT TATAAGCCAA GATAGGTAA
|
Protein sequence | MAYINTVKKL PYIYQDITAK NANSLLVVTA AVHGNELVGL KAIDALSNIA SKIPLKGRIV VIHGNPEATV QEVRYVDQDF NRAFTATNLI SEPTNHELVS AQHLSQLMLN LLDEQASNVA KHLLDIHSMS STGTPFMSFV ADKPPQLIIE QTPIPVIEGI IDSLEGCLAK WFAPYFNSSH IVECGQHQEQ STFDFGFHTL IYHLYLFDML EDCKQVQQAF DYLSCHTHPY SYLKTNICYR QAVNKDQIFE MQPGFVNLQQ VNAGQLLAKI SGKKVLAPFD GRVILPCYQR QCEEGYFISQ DR
|
| |