| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0690 |
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| Symbol | |
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| ID | 6114924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 945007 |
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| End bp | 946416 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632175 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_001759080 |
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| Protein GI | 170725054 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCAAG TTACCCCAAA TGCAGACAGT AAGATGTCGT TTTCGACATT AACGCTAAAA
CCTGAACTAC TCGATAACCT AAAGACCATG GGTTATGACT CGATGACGCC GATCCAGGCC
CAGAGTTTAC CCGCAATTTT AAATGGTGAA GATGTTATCG GCCAAGGCAA GACGGGCTCA
GGTAAAACAG CCGCCTTCGG TTTAGGTCTG CTGCACAAGC TAAACGTGAA GCGTTTTCGT
ATTCAGTCTT TGGTGCTGTG CCCTACCCGT GAGTTGGCTG ATCAAGTCGC AAAAGAGATC
CGTACCTTGG CTCGTGGTAT CCACAATATC AAGGTGTTGA CCCTGTGTGG TGGCGTGCCT
ATGGGGCCAC AAATCGGTTC TCTCGAGCAT GGCGCTCACA TTATTGTAGG AACACCAGGT
CGTATTATCG ATCACCTGTC ACGTGAGCGT TTAAGTCTTG AAGATGTGAA TACCTTAGTG
CTTGATGAAG CGGATCGCAT GCTAGAGATG GGCTTCCTGC CAGATCTTGA TTACATCATG
GCTCAGATGC CACGTGAGCG TCAGACGCTG CTGTTCAGTG CGACTTTCCC TAAACAGATC
CAGAAGATCG CCGAAGAGAT CATGTATGAG CCTGTAATGG TAAAAGTCAC TTCGACTCAC
GACAGTAATA CCATAGACCA GCACTTCTAT GAGTTGGAAA GTAACAAAGA TCGCCAAAAG
GCGCTACGCC TATTGTTGCT GCAACACCGG CCTGAGAGCG CGGTTGTTTT CTGTAATACA
AAGCGTGAAA CCAAAGATGT AGCAGCAACT TTAGCCAATG ACGGTTTTAG CGTTGTGGCT
CTGCATGGAG ATCTGGAGCA GAGAGATAGA GATATCACCT TGATGCAGTT TGCTAACAAG
AGTGCCTCTA TCATGGTAGC GACCGATGTT GCTGCTCGAG GTTTGGATAT TGAAGCGTTG
GATATGGTGG TGAACTATGA GTTTGCCTAT GATACTGAAG TTCATATTCA CCGTATTGGT
CGTACTGGCC GCGCTGGTAG TAAAGGTGCC GCTTATACTT TCTATAATTA CGAAGATGAT
TATAAGGTTA AGCTGTTAGA GGAGTATCTG GACCGCGAGA TCACTAGTGA GGTGCTACCG
CCTGAAAACC TACTCGATAC CTTCCCAACT CAACCTAAAA TGGTGACTTT GCAGATTGAT
GGTGGCAAGA AGAACAAGCT GCGCCCTGGC GATATCTTAG GTGGGTTAAC CGGCGAAGAT
GGCATCCAAG GCTCTGAAGT TGGCAAAATC AAGATCACCG ACTTCCGCTC ATATGTTGCA
GTCGACCGTA AAGTCGCCAA ACGTGCACTA CACAAGATCA CCAATGGCAA ACTTAAAGGC
CGCAGCTACC GTGCTTGGGA GATGCGTTAA
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| Protein sequence | MSQVTPNADS KMSFSTLTLK PELLDNLKTM GYDSMTPIQA QSLPAILNGE DVIGQGKTGS
GKTAAFGLGL LHKLNVKRFR IQSLVLCPTR ELADQVAKEI RTLARGIHNI KVLTLCGGVP
MGPQIGSLEH GAHIIVGTPG RIIDHLSRER LSLEDVNTLV LDEADRMLEM GFLPDLDYIM
AQMPRERQTL LFSATFPKQI QKIAEEIMYE PVMVKVTSTH DSNTIDQHFY ELESNKDRQK
ALRLLLLQHR PESAVVFCNT KRETKDVAAT LANDGFSVVA LHGDLEQRDR DITLMQFANK
SASIMVATDV AARGLDIEAL DMVVNYEFAY DTEVHIHRIG RTGRAGSKGA AYTFYNYEDD
YKVKLLEEYL DREITSEVLP PENLLDTFPT QPKMVTLQID GGKKNKLRPG DILGGLTGED
GIQGSEVGKI KITDFRSYVA VDRKVAKRAL HKITNGKLKG RSYRAWEMR
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