| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0672 |
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| Symbol | |
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| ID | 6114906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 927882 |
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| End bp | 929480 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641632158 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001759063 |
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| Protein GI | 170725037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.482202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGATAC AAGATCCCAT AGAGGAGGGC TTGGCTTCGG GGTGGAAACA TATCGATGCC
AGTCAACTGA GTGAGGGCAG AACCCTTGAA GCCGATGTTG TTATTGTTGG TAGTGGTGCC
GGCGGTGGAG TTGCTGCTGA GATCTTAACT CAAGCGGGGC TCTCTGTGAT CATCGTTGAG
GGCGGGCCGC TTAAATCATC TAACAGCTTC AATATGGAGG AGAGAAGGGC TTATCCGAAC
CTCTATCATC AAGCGGCTGG GATGAAAACT AAAGACAAAG CGATCGGTAT CTTTCAGGGG
CGAGCTGTCG GTGGATCAAC CACAGTTAAC TGGACCACCT CCATTCGAAC ACCTGAGCCC
GCGCTTGAGT TCTGGGCAAA GGAGAAGTCG GTTACCGATC TCTCCAGAGC CGAGCTTGAT
CCCTGGTTCC AGAAGATGGA GGAGCGGCTG AATATCTCCA AATGGGAGTA TGAGCCTAAC
CGTAATAATC AGGCATTAAA AACGGGCTGT GAAAAACTGG GTTGGGATTT CACTGTCATC
AAGCGTAATG TAAAAGGTTG CTGGAATACT GGCTATTGCG GCATGGGCTG TCCGGTAAAT
GCTAAGCAAT CTATGTTAGT CACCACCATA CCTTCAGCAT TGGATTTAGG GGCCACATTA
GTCAGCAGGG CTAAGGTGAT TGAACTTGAA CACCACAATG GCAAAATCAC AGGGGTTAAA
GCCCAAGCCC TTGATGAGCA ACTAAAACCG ACCGCTATTG AGCTGAACCT CAAGGCTAAA
CATTATATTT TGTCTGCGGG GGCGATCCAC ACGCCAACTA TCTTGATGCG CTCAGGGACA
GATGATCCCC ACCAGCTTCT GGGTAAGCGA ACCTTCCTCC ACCCAACTCT GCTCAGCGGA
GCTGTGTTTA GCGACCCAAT CAATGCCCAC AGCGGCGCAC CACAATCCAT CTATAGCGAT
GAGTTTGTTT GGCGTGATGG CGCAGCAGGC GAGCTAGGTT ACAAGCTTGA AGTACCGCCT
GTGCACCCAA TCCTTATCTC ATCAAAAACA ATTGGCTACG GTAAGAGTCA CGCAGCCTTG
ATGGAGAACT TCAATCAGTT GCAGGTAACC ATTGCCTTAG TGCGCGATGG TTTTCATCCC
GATAGCCAAG GTGGACAGGT CCATCTTACT GATACTGGGT TTGCGCTGGA CTATCCATTG
ACCGATGCTT TTTGGCACTC TGCCAGACGG GCATTTGCCA GCATGGCAGA GTTGCAGTTT
GCTGCGGGGG CAAAACAGGT GTTACCCATC AGCGAAGGTG TGAGTTACCT TAACAGCTGG
AAAGAGGCTA AATCTGTGAT TGCCGATATG GAACTGGCGC CGCTAAAAAC CGTCGTGGCA
TCGGCTCATG TGATGGGTGG CTGTGCTATG GGAGAAGACA CCAAAATAGC CATGGTAGAT
AGTCATGGTC GCTCCCACTA CTACGAGAAC CTCTCCGTAA TGGATGGCTC TATCTTCCCC
ACAAGCTTAG GGGCTAACCC GCAACTGTCG ATTTATGGAA TGACCGCAAG AAATGCAACC
AAACTGGCAG AGGAGTTAAC CGCTTCTTCT TTAGCTTAG
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| Protein sequence | MAIQDPIEEG LASGWKHIDA SQLSEGRTLE ADVVIVGSGA GGGVAAEILT QAGLSVIIVE
GGPLKSSNSF NMEERRAYPN LYHQAAGMKT KDKAIGIFQG RAVGGSTTVN WTTSIRTPEP
ALEFWAKEKS VTDLSRAELD PWFQKMEERL NISKWEYEPN RNNQALKTGC EKLGWDFTVI
KRNVKGCWNT GYCGMGCPVN AKQSMLVTTI PSALDLGATL VSRAKVIELE HHNGKITGVK
AQALDEQLKP TAIELNLKAK HYILSAGAIH TPTILMRSGT DDPHQLLGKR TFLHPTLLSG
AVFSDPINAH SGAPQSIYSD EFVWRDGAAG ELGYKLEVPP VHPILISSKT IGYGKSHAAL
MENFNQLQVT IALVRDGFHP DSQGGQVHLT DTGFALDYPL TDAFWHSARR AFASMAELQF
AAGAKQVLPI SEGVSYLNSW KEAKSVIADM ELAPLKTVVA SAHVMGGCAM GEDTKIAMVD
SHGRSHYYEN LSVMDGSIFP TSLGANPQLS IYGMTARNAT KLAEELTASS LA
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