| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0667 |
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| Symbol | |
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| ID | 6114901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 920862 |
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| End bp | 923990 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641632153 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001759058 |
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| Protein GI | 170725032 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.344163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGA TTATCTCCTT CGCCTTAAAA AGGCGCTGGC TTGTGCTCAC GGTAACCTTG
CTTATCGCAC TCTTGGGGGG TTATAACACG CTTAAGTTGC CGATCGATGC TGTACCAGAT
ATCACCAATG TGCAGGTGCA GATAAATACA GCGGTTGCTG GCTACTCACC GCTAGAGTCT
GAGCAGCGCC TGACCTATGT AATTGAAAAT GCTATGGCGG GGATCCCAAA CCTTGACCAT
ACCCGTTCAA TCTCCCGTTA CGGTTTATCT CAGATCACAG TGATCTTCGA AGAGGGCACC
GATATCTACT GGGCTAGGCA GCAGATAGCT GAGCGTCTTC AGGGGATCCG CGGTGAACTG
CCTGCTGAAG CGGAACCTGC TTTAGGGCCA GTAAGTAGTG GGCTGGGGGA GGTATTTACC
TACTCCATTC GTGCTCTTGA TGGTGCGCTG AAGGAGGATG GCACGGCGTA CAGCGCTGAA
GATCTGCGTA CCATTCAGGA TTGGATCATA AGGCCCCAAC TCGTCAAAGT ACCAGGGGTG
ACAGAGATCA ACAGTTTAGG GGGCTATGAG CGCGAGTATC AGGTTGCACC AGATCCTGGC
AAACTGTTGG CGTTTAAAGT CACTGTCAAC GATGTGATCA CGGCTCTTGA GCGTAATAAC
CGTAACGTTG GTGCCGGATA CATAGAGAGA AATGGTGAGC AGTGGCTAGT TCGCTCGCCT
GGTCAACTTA AAGATCTGGA GGAGATCCGT CAGGTCGTGG TCACTAAGCG TGATGATGCA
CCTGTGCGTA TCGGCGATCT GGCTGAGGTG TTTTATGGTA AGCAGCTAAG AACTGGCTCT
GCGACACAAA ATGGCGAAGA AACAGTGCTT GGCACCGCCT TTATGTTGCT GGGTGAAAAT
AGCCGAGTTG TGGCAAAAGA GGTGGGTGAC AAGCTCAAAG AGGTGAATGC TAGCCTGCCT
GATGGGATTG TAGCCGAAGC CGTATATGAC AGAACTAGCT TAGTGGATCA AACCATAGCT
ACGGTGCAGA AGAACCTGTT CGAAGGTGCT GTGCTGGTGA TTGTGGTTCT ATTTGCTCTG
TTAGGTAATT TTCGCGCCGC CCTGATCGCA GCACTGGTGA TCCCGCTGAG TATGTTGTTT
GCTATTACGG GCATGACGAC TAACCGTGTC TCGGGTAACT TGATGAGTCT TGGTGCTATC
GATTTCGGTA TTATCGTCGA TGGCGCAGTG ATTATTGTCG AGAATGCCCT GCGACGACTA
GGCATGGCGC AGAAGCAACA CGGTAGATTG CTCACCTTAG AGGAGCGTCT AAAACTCGTA
TTTGAAGCGA CACGAGAGGT GTTCCGCCCT GCGGTATTTG GTGTCTTGAT CATCATGTTG
GTATATCTGC CAATATTTGC CTTGAGCGGC GTTGAAGGTA AGATGTTCCA CCCGATGGCC
TTTACTGTGG TGGCAGCCTT GATAGGTGCG CTTATCTTCT CGGTGACTTT TGTCCCTGCG
GCCATTGCGA TCTTTGTGAA GGGTAAGGTT AACGAAAAGG AGAACTTCTT GATGGCCAGA
GCGCGCAGCG TCTATGAGCC TGTATTGTTC TTCTCCCTTA AACGTCCAGC CATTATCCTG
CTTGCTGCAG CGGCTTTAAT GAGCGTTAGC CTCTATCAGG TGAGCCGCTT AGGTTCAGAG
TTTTTACCTA AGCTTGATGA AGGTGATATT GCCATGCATG CCATGCGTAT TACTGGCACA
GGACTTGAGC AATCTACTCA GATGCAGAAG GAGCTTGAGC TGGTGATTGC TGAGCTTGAT
GAGGTAGAGC GTGTGTTCTC CAAGATTGGT ACTCCCGAGG TGGCGACAGA TCCTATGCCA
CCGAGTGTTT CCGATACCAT ATTGATCATC AAGCCGAGAT CCCAATGGGC AGATCCGAGT
AAGAGTAAAG CGCAGTTTAT GGATGAGCTA AGGGACTTAG TAAAACAGGT GCCCGGCAAC
AACTATGAGT TTACTCAGCC TATTGAGATG CGTTTTAACG AACTCATCGC CGGGGTTAGG
GCTGATGTGG CGCTGCGTAT CTATGGTGAC GATCTCGATA CTCTTAAGGC GGCGGGCGAT
CGTGCTCAAG CGCTGTTTCA TAAAATTGAT GGTGCTAAAG ATGTGCGTGT AGAGCAGATG
TCTGGCCTGC CGACACTCTC TGTTGAGCCT AACCGTGATC ACTTAGCGCT GTTAGGTCTA
ACTATTGTTG ATGTACAGCA AGCGTTGCAA AGTGCTGTCT CAGGTGTGCC TGTTGGTCTT
ATCTATGAGG GAGATCGCCG CTTTAAGCTG GTTGTTCGTA TGAAAGATGA GATAAGCCAT
GATCTGAGGG CATTGGAGAA GCTACCTATC GCCTTGCCGG CGGATCTAAA TCCTGATTTG
AGTTATGTCC CTCTTGGGGA GGTGGCTGAT ATTCGCTTTA AGGTGGGGCC TAATCAGATA
AATCGCCAAA GCGGAAAACG TCATGTGGTG GTGACGGCAA ATGTTGAGGG GAGAGATCTG
GGCTCGTTTA TTCAAGATAC TAAGGCGCTG ATGGGAGATG AACTTAATCT GCCAAGCGGC
TATTGGAGTG AATATGGCGG CACATTTGAG CAGCTAGAAT CGGCATCAAA TCGCTTGATG
ATTCTGGTTC CGCTCACCTT GCTACTCATC TTTGGTCTCC TTTATAGCGC CTTTGGTTCT
GTCAGAGACT CACTGATCAT CTTCAGTGGT GTGCCCCTTG CCTTAACTGG TGGCGTGTTG
GCCTTAGTGC TAAGGGATAT GCCACTGTCT ATCTCGGCAG CGGTAGGTTT TATCGCACTC
TCTGGTATAG CTGTGCTGAA TGGCGTGGTG ATGTTGAGCT TTATTAAGGA GCTTAAACAC
AAAGGGTTAG CGCTTGTCGA TGCGATCAAA CAGGGAGCAA GTCAGCGTTT ACGCCCAGTT
ATGATGACGG CGCTGGTGGC CAGTTTAGGC TTTGTCCCTA TGGCATTTAA TGTCGGTACC
GGTGCTGAAG TTCAGCGCCC ACTGGCAACC GTGGTGATTG GTGGTATCGT CTCATCGACC
CTGCTGACCT TAGTGATCTT GCCTGTGCTT TATTTGTTGG TGTACCGCAT AAGTGGTAAA
CGAGCTTGA
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| Protein sequence | MDTIISFALK RRWLVLTVTL LIALLGGYNT LKLPIDAVPD ITNVQVQINT AVAGYSPLES
EQRLTYVIEN AMAGIPNLDH TRSISRYGLS QITVIFEEGT DIYWARQQIA ERLQGIRGEL
PAEAEPALGP VSSGLGEVFT YSIRALDGAL KEDGTAYSAE DLRTIQDWII RPQLVKVPGV
TEINSLGGYE REYQVAPDPG KLLAFKVTVN DVITALERNN RNVGAGYIER NGEQWLVRSP
GQLKDLEEIR QVVVTKRDDA PVRIGDLAEV FYGKQLRTGS ATQNGEETVL GTAFMLLGEN
SRVVAKEVGD KLKEVNASLP DGIVAEAVYD RTSLVDQTIA TVQKNLFEGA VLVIVVLFAL
LGNFRAALIA ALVIPLSMLF AITGMTTNRV SGNLMSLGAI DFGIIVDGAV IIVENALRRL
GMAQKQHGRL LTLEERLKLV FEATREVFRP AVFGVLIIML VYLPIFALSG VEGKMFHPMA
FTVVAALIGA LIFSVTFVPA AIAIFVKGKV NEKENFLMAR ARSVYEPVLF FSLKRPAIIL
LAAAALMSVS LYQVSRLGSE FLPKLDEGDI AMHAMRITGT GLEQSTQMQK ELELVIAELD
EVERVFSKIG TPEVATDPMP PSVSDTILII KPRSQWADPS KSKAQFMDEL RDLVKQVPGN
NYEFTQPIEM RFNELIAGVR ADVALRIYGD DLDTLKAAGD RAQALFHKID GAKDVRVEQM
SGLPTLSVEP NRDHLALLGL TIVDVQQALQ SAVSGVPVGL IYEGDRRFKL VVRMKDEISH
DLRALEKLPI ALPADLNPDL SYVPLGEVAD IRFKVGPNQI NRQSGKRHVV VTANVEGRDL
GSFIQDTKAL MGDELNLPSG YWSEYGGTFE QLESASNRLM ILVPLTLLLI FGLLYSAFGS
VRDSLIIFSG VPLALTGGVL ALVLRDMPLS ISAAVGFIAL SGIAVLNGVV MLSFIKELKH
KGLALVDAIK QGASQRLRPV MMTALVASLG FVPMAFNVGT GAEVQRPLAT VVIGGIVSST
LLTLVILPVL YLLVYRISGK RA
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