| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0666 |
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| Symbol | |
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| ID | 6114900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 919524 |
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| End bp | 920849 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632152 |
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| Product | biotin/lipoyl attachment domain-containing protein |
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| Protein accession | YP_001759057 |
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| Protein GI | 170725031 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.188115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0158775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTA ACGTTAAAAA GCTCTCATCG GTATTGATGG CGACAGTGTT TACTTTTACA
GCAATCAGTT TCACTGCGCT GCAACCGACA AACCTTGCAT GGGCAAGTGG CGATCATGGG
CATGGACATG AGGAGGAAGA GGAGCATGTT CCAGAAGGCC CCCATGGTGG TCGTCTACTC
CACAATGGGG AGTTTGAGAT TGAGGTGACC ATGGTTGAGT CGGGGATCCC GCCAGAGATG
AGGGTATATG CCTACTACAA AGAGCAGGCT GTAAAGCCTG AGGATATTAA GCTTGAACTG
CTGTTAAATC GTCTCGGGGG AAAAACTGAC ACCGTTAACT TTACTGCTGA AGGTGACTAT
CTCGTCAGCA CTACAAGTAT TGCGGAGCCT CACTCTTTTG AAGTTGAGGT TCATGCTGGC
TTTAAGGGGC AATCCTATGA TTGGCATTAT GACAATTATA CCGGTCGCAC CGAGATCAAT
GACCGTCTGC TAAAGCTATC GGGAGTGAAA ACGGCTCAAG CCAGTGAGCA GGAGTTACTG
TTTACCGATA CCCTGTTTGG CATTGTTGCC CCTATTACCG ATAAGCAGTT TAGCGTTACC
GCGCCTTACA CTGGTGTGAT TGAACAGCTG CATGTGAGTA TTGGTGAGAG AGTTGAGAAA
GGCCAAGTGA TCGCAACGGT ACGTAACTCT GGCACGCTGC AAAGTTATCA GGTTAAAAGC
CCTGCTGCAG GTCAAGTGAC TGAGCAGCTT CTTAGTTTAG GAGACAGCAC CTATAACAGA
GCCCTTGTTC GTATCAGCGA CCTCTCATCT GTGTGGATAG ATCTGTCAGC TTTCCCTAAA
AGCATAGATA AGTTGTCGCT GGGGCAAAAG GTGAGCATCC TTGACGATCA CAGCGATGAA
GTCAGCTCTA GTGAACGGTC AAATGATCAG TATAGTAATC AGCACAATAG CGCTGTAGCC
AGTAGCACAA TTAGCTATAT CGCCCCCAAT ATGACTGGCG GGCATATTGC TCGTGTTCGC
GCTGTGATTG AGAATGACCA TGGTCATTGG CGTCCCGGCA TGCATATTCA AGCTGCCATT
GAGACCAGCA GTAAGCGGGT GCCTCTAGCC GTGCGCGTCG ATGCGCTGCA GACCTTTATG
GATAAGCCCG CTGTATTTGT TAAGCATGGC AATACCTTTG AGGTGCGCCT GCTGACCTTA
GGTGAGAGCG ATGGCATCTA TACCGAAGTG TTAGCTGGGC TGGAGCATAA CAGCGAATAT
GTTGTTGAAA ATAGTTATCT ATTAAAGGCG GATATTATGA AAAATGCCGC TAAACATGTG
CACTAG
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| Protein sequence | MDLNVKKLSS VLMATVFTFT AISFTALQPT NLAWASGDHG HGHEEEEEHV PEGPHGGRLL
HNGEFEIEVT MVESGIPPEM RVYAYYKEQA VKPEDIKLEL LLNRLGGKTD TVNFTAEGDY
LVSTTSIAEP HSFEVEVHAG FKGQSYDWHY DNYTGRTEIN DRLLKLSGVK TAQASEQELL
FTDTLFGIVA PITDKQFSVT APYTGVIEQL HVSIGERVEK GQVIATVRNS GTLQSYQVKS
PAAGQVTEQL LSLGDSTYNR ALVRISDLSS VWIDLSAFPK SIDKLSLGQK VSILDDHSDE
VSSSERSNDQ YSNQHNSAVA SSTISYIAPN MTGGHIARVR AVIENDHGHW RPGMHIQAAI
ETSSKRVPLA VRVDALQTFM DKPAVFVKHG NTFEVRLLTL GESDGIYTEV LAGLEHNSEY
VVENSYLLKA DIMKNAAKHV H
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