| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0657 |
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| Symbol | astD |
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| ID | 6114891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 910548 |
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| End bp | 912008 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632143 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_001759048 |
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| Protein GI | 170725022 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00563166 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000657572 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCAAT TTATTAATGG TCAGTGGGTT GCTGGCCTAG GTCACGAAGT GACATCTAAA
AACCCAGCAA ACAGTGAAGT TATCTGGAGC AGTAAAACAG CTACCGCTGA ACAGGTTAAT
ACCGCCGTTG AAGCTGCACG TGAAGTACAG TTTGACTGGT TTATGCTGGG CTTTGAAGGT
CGTTTGGCTA TCGTTGAAGC TTATAAAACT CAGCTTGAAG AGCATAAAGC AGAGATGGCG
GAAGTGATCG CTCAAGAAAC CGGTAAGCCG CAGTGGGAAA CCGCCACTGA AGCTGGCGCC
ATGATAGGCA AAATTGGTCT TTCTGTTGCT GCTTACAATA AGCGTACTGG CAGCTCTGAA
AACGATACAC CAGCTGGACG TGCTGTATTG CGTCATAAGC CCCATGGTGT GGTGGCTGTG
TTTGGCCCTT ATAACTTCCC AGGTCATTTA CCAAATGGTC ATATTGTTCC TGCTCTGCTT
GCGGGTAACA CTGTGGTTTT CAAACCATCG GAATTGACAC CTAAAGTGGC TGAGCTGATG
CTTAAGCTTT GGGAGAAAGC GGGACTGCCT GCTGGTGTGA TTAACTTGGT TCAAGGTGAA
GTGGAGACAG GTAAAGCCCT AGCTTCACAT GAGCAGATCG ATGGTCTGTT CTTTACTGGA
AGTTCTCGTA CTGGCCATAT TTTGCATCAG CAGTATGCTG GTGAACCAGG TAAGATTTTA
GCTTTAGAGA TGGGTGGTAA TAACCCACTT ATCATCAAAG GTGTAAAAGA CACCAAAGCT
GCAGTCCATG ACATCATTCA GTCGGCTTAT ATCTCATCTG GTCAACGTTG TACTTGTGCT
CGTCGTCTCT ATGTTGAGAA GGGCGCAGAG GGCGATGCAC TACTTGCAGA GCTTGCCGAT
GCGGTTAAGC GCATTCAAGT TGGTGCTTGG AACAGCCAGC CACAACCGTT TATGGGCTCT
ATGATCTCAG AAACAGCTGC TAAAGGCATG GTTGAGTCTC AGCGTAACTT GCTGAACCTA
GGTGGTAGCT CACTGGTTGA ATTAACACAT TTAAAAGAGG GCACTGGGCT AGTTTCACCT
GGTCTTATTG ATGTGACTCA AGTGATTGAG CTGCCTGATG AGGAGTACTT CGGTCCTCTG
CTTCAAGTGG TGCGTTATAC CGATTTTGAT GAAGCGATTA AGCTGGCGAA CAAGACTCGT
TATGGCCTAT CAGCTGGTAT TCTTGCTGAT AGCCGTGATG ACTACGAGTA CTTCCTAGCG
CGTATTCGCG CGGGCATTGT TAACTGGAAT AAGCAGATCA CAGGCGCATC TGGTGCAGCT
CCATTTGGTG GTGTTGGCGC ATCGGGTAAC CACAGAGCGA GCGCATTTTA TGCTGCTGAT
TACTGTGCAT ACCCAGTTGC TTCTGTTGAA GCTGATGCGG TAAGCCTGCC TGCGAGTCTG
AGTCCAGGTT TAAGTATTTA A
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| Protein sequence | MTQFINGQWV AGLGHEVTSK NPANSEVIWS SKTATAEQVN TAVEAAREVQ FDWFMLGFEG
RLAIVEAYKT QLEEHKAEMA EVIAQETGKP QWETATEAGA MIGKIGLSVA AYNKRTGSSE
NDTPAGRAVL RHKPHGVVAV FGPYNFPGHL PNGHIVPALL AGNTVVFKPS ELTPKVAELM
LKLWEKAGLP AGVINLVQGE VETGKALASH EQIDGLFFTG SSRTGHILHQ QYAGEPGKIL
ALEMGGNNPL IIKGVKDTKA AVHDIIQSAY ISSGQRCTCA RRLYVEKGAE GDALLAELAD
AVKRIQVGAW NSQPQPFMGS MISETAAKGM VESQRNLLNL GGSSLVELTH LKEGTGLVSP
GLIDVTQVIE LPDEEYFGPL LQVVRYTDFD EAIKLANKTR YGLSAGILAD SRDDYEYFLA
RIRAGIVNWN KQITGASGAA PFGGVGASGN HRASAFYAAD YCAYPVASVE ADAVSLPASL
SPGLSI
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