| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0655 |
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| Symbol | argD |
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| ID | 6114889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 908162 |
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| End bp | 909379 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632141 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_001759046 |
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| Protein GI | 170725020 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000579113 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGTAA ACAAGACCCT GACAAGAGCC CAGTTTGATG ATGTGATGGT GCCTAACTAT
GCGCCTTCGG CTGTTATCCC TGTTCGTGGA GAGGGAAGCC GAGTTTGGGA TCAGGAGGGG
AATGAGTTTA TCGATTTTGC TGGTGGTATT GCGGTTAACT GTCTTGGTCA CTGTCATCCA
GCCTTAGTGA GCGCACTGAA GGAGCAAGGT GAAAAACTTT GGCATCTTTC AAATGTAATG
ACTAACGAAC CTGCATTAGC GCTAGCGACT AAACTAGTCG ATGCAACGTT TGCTGATCGT
GTTTACTTTG CTAACTCAGG CGCTGAAGCC AACGAAGCTG CATTGAAACT TGTTCGCCGT
TATGCAATGG ATAAGTTTGG TGCAGAGAAA GATCAAATTA TTGCATTCGA TAAAGCTTTC
CATGGCCGCA CCTTCTTCAC TGTTAGTGTT GGTGGTCAAG CGGCATATTC TGATGGTTTC
GGTCCTAAGC CACAGAGCAT TACTCATGTT CCTTTCAATG ATATTGCGGC ACTAGAAGCT
GTTATTTCTG ATACTACCTG CGCTGTTATG ATGGAGCCAC TTCAAGGCGA AGGCGGAATT
ATCGACGTCG ATCCTGAGTT CCTTAAAGCG GTTCGTGCCT TGTGTGATAA GCACAATGCA
CTATTAGTAT TTGATGAAGT TCAAACTGGT GTTGGTCGTC TAGGTGAGCT ATACGCATAT
ATGCGTGGTG ACGTGGTACC TGACGTTTTG ACAACGGCTA AGGCACTTGG CGGCGGATTC
CCAATTGCAG CTATGCTGAC TACCAAAGAG ATTGCCGATC ACCTTAAGAT AGGCACTCAT
GGTTCAACTT ATGGTGGTAA CCCACTTGCT TGTGCTATCG GTAATGCTGT CCTTGATGTG
GTTAACACTC CTGAAGTGCT TAACGGCGTT AAGGTACGTG AGCAGCTACT TCGTGACGGT
CTGAATAAGA TCAACGATAA GCATCAGGTG TTTGCTGAAG TTCGTGGACA GGGGCTGCTA
CTGGGCGCTG TTCTCAATGA TAAGTATCAG GGACGCGCTA AAGAGTTCCT TGTTGCATCT
GTAGGCGAAG GCTTAATGAG CTTAGTTGCT GGTGCAAACG TAATACGTTT TACTCCATCT
CTGGTTATTC CTGAAGCAGA TATTGCTGAA GGTCTAGTAC GCTTTGAGCG TGCTGTAGCT
AAAGTCGTTG CGGCCTAA
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| Protein sequence | MSVNKTLTRA QFDDVMVPNY APSAVIPVRG EGSRVWDQEG NEFIDFAGGI AVNCLGHCHP
ALVSALKEQG EKLWHLSNVM TNEPALALAT KLVDATFADR VYFANSGAEA NEAALKLVRR
YAMDKFGAEK DQIIAFDKAF HGRTFFTVSV GGQAAYSDGF GPKPQSITHV PFNDIAALEA
VISDTTCAVM MEPLQGEGGI IDVDPEFLKA VRALCDKHNA LLVFDEVQTG VGRLGELYAY
MRGDVVPDVL TTAKALGGGF PIAAMLTTKE IADHLKIGTH GSTYGGNPLA CAIGNAVLDV
VNTPEVLNGV KVREQLLRDG LNKINDKHQV FAEVRGQGLL LGAVLNDKYQ GRAKEFLVAS
VGEGLMSLVA GANVIRFTPS LVIPEADIAE GLVRFERAVA KVVAA
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