| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0653 |
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| Symbol | |
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| ID | 6114887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 904562 |
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| End bp | 906196 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632139 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001759044 |
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| Protein GI | 170725018 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000617306 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACCCG CCATTCTTAT TATTACTTTA GCTTGTGGCA TGCTTGTCAG TCGAGTCGGA
TTGCCACCGC TGATTGGTTA CCTTGTTGCG GGCTTTGTGC TGTTTTTATT TGGAATTGAC
GAATCCAGCC TTCCCCTGCT CGAGCAGCTG GCGGAGTTAG GCGTAACCCT ACTGCTTTTT
GCAATTGGCT TAAAACTGGA TATCAAAAGT CTCTTTAAAG CAGAAGTATG GGCAGGCTCT
AGTCTGCACT TAATGGGCTC GATGATCTTC TTTATTCCCC TACTTAAACT ACTGGGAATG
CTCGGTCTGG AACAATTAAC CGGACTCGAG TTTAATCAAC TGGCTCTGTT GGCGTTCGCC
TTAAGCTTTT CCAGTACTAT TTTTGCCGTT AAGATACTGG AAGATAAGGG TGATATGCAG
TCACTCTATG GCCGTGTTGC TATCGGTATC TTGATTATGC AAGATATCTT TGCTGTTGCC
TTTTTAACTA TCTCTAAAGG TGATATTCCC TCTGTTTGGG CCTTTGGTCT GCTACTGCTT
CCCTTAGCAA AACCACTTAT CTATCGCGCT TTCGATCGCG TTGGTCACGG TGAACTGCTG
GTCCTCTTTG GCCTAGTTAT GGCCTTAGTA TTAGGGGCAT GGCTATTTGA AGTGGTCGGA
TTAAAGCCAG ATCTTGGCGC ACTGATAATC GGTATTTTAT TAGCGGGGCA TCCTAAGTCT
TCAGAACTGG CTAAATCCCT CTTCTACTTC AAAGAGCTCT TTCTGGTGGC CTTTTTCCTC
ACAGTAGGAC TCAATGGATT ACCTAGCTTC TCCGATATCG GGCTCGCCAC ACTGTTAGTG
GTTATAGTGC CTATTAAGAT GCTGCTTTTC CTCTACCTAC TAACCCACTT TAAGCTCAGA
TCGCGCACCG CTCTAATGAG TTCATTTAGC TTAGGTAACT ACAGTGAGTT CGGCTTAATA
GTCGCAGCGG TAGCCACCAG TAAAGGTTGG CTTCCCTCTC AGTGGATGGT TATCCTTGCT
GTTGCGCTAA GTATTAGCTT CCTGTTTGCA GCGCCACTGA ACGCAGCTTC CAGTAGGCTA
TACCAAAAAT TACAGGGCCG CTTAATTAAG CTTGAAAGAC ACCCTCTTCA TCCGGAAGAC
AGGCCGATCC CAGTTGGTAA CCCTAGGTTC CTTATCTTAG GTATGGGACG GATTGGTAGT
GGAGCTTATG ATGAACTCAA AGCCAATTTT GATGGCGAAA TATTAGGTAT TGAACATAAG
CAGGATCTAG CTGACTTCCA TCAAAGTGAA GGACGTAATG TGGTTCAAGG CGATGCCTCA
GATACCGACT TCTGGGAAAA ATTAGATCGC GCGCCAAACC TAGAACTTGT TCTGTTAGCT
ATGCCGCACC ATATCGGTAA TCAGTTCGCC GTCGAGCAAC TTAAGCGCCT TAACTATCAA
GGTAAACTCA GCGCCATAGT CCAATATAGT GATGATGCCC AATCTCTACG AGAATCCGGC
GTACACAGTA TCTATAACCT CTATGAAGCA GCTGGTGCTG GTTTTGTTGA GCATGTTGTA
AAAGATCTTC TTGCTGATAG CCAAACTAAA GAGGAAGACA CCTCTGAGGT AGTAGAAGTA
AAACAGCAAG GATAG
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| Protein sequence | MEPAILIITL ACGMLVSRVG LPPLIGYLVA GFVLFLFGID ESSLPLLEQL AELGVTLLLF
AIGLKLDIKS LFKAEVWAGS SLHLMGSMIF FIPLLKLLGM LGLEQLTGLE FNQLALLAFA
LSFSSTIFAV KILEDKGDMQ SLYGRVAIGI LIMQDIFAVA FLTISKGDIP SVWAFGLLLL
PLAKPLIYRA FDRVGHGELL VLFGLVMALV LGAWLFEVVG LKPDLGALII GILLAGHPKS
SELAKSLFYF KELFLVAFFL TVGLNGLPSF SDIGLATLLV VIVPIKMLLF LYLLTHFKLR
SRTALMSSFS LGNYSEFGLI VAAVATSKGW LPSQWMVILA VALSISFLFA APLNAASSRL
YQKLQGRLIK LERHPLHPED RPIPVGNPRF LILGMGRIGS GAYDELKANF DGEILGIEHK
QDLADFHQSE GRNVVQGDAS DTDFWEKLDR APNLELVLLA MPHHIGNQFA VEQLKRLNYQ
GKLSAIVQYS DDAQSLRESG VHSIYNLYEA AGAGFVEHVV KDLLADSQTK EEDTSEVVEV
KQQG
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