| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0640 |
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| Symbol | |
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| ID | 6114874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 887672 |
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| End bp | 888349 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641632126 |
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| Product | single-strand binding protein |
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| Protein accession | YP_001759031 |
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| Protein GI | 170725005 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0629] Single-stranded DNA-binding protein |
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| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000164603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000189971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCCAGTC GTGGTGTCAA TAAGGTAATT TTGGTCGGTA ATTTGGGTAA AGACCCTGAA
GTTCGTTATA TGCCAAATGG CAATGCCGTC GCCAACTTTA CAGTGGCGAC GAGTGAGTCT
TGGAAAGACC AACAAGGTCA GCCACAAGAG CGTACTGAAT GGCATAATAT TGTCATGTAC
CGTCGTCTAG CTGAGGTTGC TGGTGAATAC CTTAAGAAAG GTTCTAAGGT TTATATCGAA
GGTAAACTGC AAACTAGCAA GTGGCAAGAT CAGGCAACCG GTCAAGACAG ATATAAGACT
GAGATCAATG CCAATGAGAT GCAGATGCTA GACAGTCGTG GTCAAGGCGG CGGTCAACAG
CAAGGTGGTT ATGGTCAGCA GCAGGGGCAG CAGAATCAGT ACAATGCACC TCAACAGCAA
GCACCACAAC AGGGTGGTTA TGCGCCTAAG CCTCAAGCTG CTCCTCAGCA ACAGGCACCT
CAGCAGGGCG GATACCAGTC GCAGCAGCAA GGTGGTCAAC AGCAGCAAGC GCCAGCTTAT
GCACCTAAGC CACAAGCAGC TCCACAGCAG CAAGCGCCAC AACAGCGCCC AGCGCCTCAG
CCTCAACAGC AAGCTGCACC GCAACAGAAC TTTACCCCAG ACCTTGATGA TGGTTGGGAT
GACGATATCC CGTTTTAG
|
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| Protein sequence | MASRGVNKVI LVGNLGKDPE VRYMPNGNAV ANFTVATSES WKDQQGQPQE RTEWHNIVMY
RRLAEVAGEY LKKGSKVYIE GKLQTSKWQD QATGQDRYKT EINANEMQML DSRGQGGGQQ
QGGYGQQQGQ QNQYNAPQQQ APQQGGYAPK PQAAPQQQAP QQGGYQSQQQ GGQQQQAPAY
APKPQAAPQQ QAPQQRPAPQ PQQQAAPQQN FTPDLDDGWD DDIPF
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