| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0639 |
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| Symbol | |
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| ID | 6114873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 886227 |
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| End bp | 887594 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632125 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001759030 |
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| Protein GI | 170725004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000191567 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000048698 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAATA ACGGACTCTC AAAGACTGAG AAAAAAGTCG CGTTCTCTTT AGCCAGTGTA
TTTGGTTTGC GCATGATGGG CTTGTTTATG ATCATGCCTG TTTTTGCACT TTATGGGCAA
CATCTGCAAG GTTTTTCACC ACTGTGGGTA GGTATTGCTA TTGGCGCTTA TGGTCTGACT
CAAGCTATTT TGCAGATCCC TATGGGGATG TTATCGGATA AGTTTGGCCG TAAACCTATT
ATCCTTATCG GCTTACTGAT GTTTGCCTTT GGTAGTTTAG TGGCCGCCAA CGCCGACACT
ATTTACGGTG TGGTTGCTGG TCGTGCGATA CAGGGTATGG GGGCGATAGC CGCTGCTGTG
CTTGCCTTAG CGGCTGATCT GACTCGTGAT GAGCAGCGTA CCAAGGTGAT GGCCATTATC
GGTATGTGCA TCGGATTTTC GTTTGCATTG TCTTTGCTGG TGGGACCGAT TGTCGCTCAA
TACTTAGGTT TATCTGGTTT GTTTGCCATG ACTGCGGGCC TCGCGGTGTT GGGGATGATT
ATTGTACAGC TGCTAGTGCC GAACCCCATC TCTCAAGCCC CCAAGGGAGA TACATTAGCG
ACGCCAGCTA AGTTGAAGGC GATGGTGACT GACCCTCAAC TGTTTCGTCT TGATGCGGGG
ATCTTTATTC TACACTTAGT GTTGACCGCT GTATTTGTTG CCTTGCCGCT GGATTTAGTT
GATGCAGGTT TGGCCAAAGA GAAGCATTGG ATGCTCTATT TCCCCGCTTT TATGGGGGCA
TTCTTTCTGA TGGTGCCGCT CATTATCATT GGCGTGAAGA AGAAAAACAC CAAGGCGACA
TTTCAGGTTT CACTGTTAAT CATGATGCTG GCATTGGCTT CAATGGCACT GTTTGCCAAT
AATTTAGTTG TGCTAAGTAT CGCGGTTGTG CTGTTTTTTA CTGGCTTTAA CTATTTGGAG
GCATCGCTTC CAAGCTTGAT TGCTAAGTTT TGTCCCGTTG GTGATAAAGG TTCCGCCATG
GGCGTATACT CAACCAGTCA ATTTCTTGGT GCCTTCTGTG GTGGTATATT AGGCGGTGGT
GCTTATCAGC TTGTGGGGGC CGAAGGGGTT TTCGCAGTTG CGTTGGGTTT GATGACGCTC
TGGTTACTGC TGACATTAGG CATGAAAAAC CCAGTGTTGT TAAAGAGCTA TACTCTTGAA
GCAAAAGTTG AAGGTAAAGA GCAGGCAAAG GTGATGGCGA CTGAGCTGTC TCAGCTTGCA
GGTGTCGCCG AGGCAATAGT GGTTCTTGAA GAGAAAGTGG CTTATTTAAA AGTTGATGAG
CATTTCGATT TAAGAGAAGC GCGAGCTGTG TTAGGCTCTG TCAGTTAA
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| Protein sequence | MANNGLSKTE KKVAFSLASV FGLRMMGLFM IMPVFALYGQ HLQGFSPLWV GIAIGAYGLT
QAILQIPMGM LSDKFGRKPI ILIGLLMFAF GSLVAANADT IYGVVAGRAI QGMGAIAAAV
LALAADLTRD EQRTKVMAII GMCIGFSFAL SLLVGPIVAQ YLGLSGLFAM TAGLAVLGMI
IVQLLVPNPI SQAPKGDTLA TPAKLKAMVT DPQLFRLDAG IFILHLVLTA VFVALPLDLV
DAGLAKEKHW MLYFPAFMGA FFLMVPLIII GVKKKNTKAT FQVSLLIMML ALASMALFAN
NLVVLSIAVV LFFTGFNYLE ASLPSLIAKF CPVGDKGSAM GVYSTSQFLG AFCGGILGGG
AYQLVGAEGV FAVALGLMTL WLLLTLGMKN PVLLKSYTLE AKVEGKEQAK VMATELSQLA
GVAEAIVVLE EKVAYLKVDE HFDLREARAV LGSVS
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