| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0631 |
|---|
| Symbol | |
|---|
| ID | 6114865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 876068 |
|---|
| End bp | 877030 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641632117 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001759022 |
|---|
| Protein GI | 170724996 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.789426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGCTA ATTTCAAACT AGGTTTTTTC TTTATCTCAA CGGCGGTTCT ATTTTGGGGC
ATTCTTCCGA TAGCACTAAA GTTGTCAGCG AGCTTTATTG ACCCTGTGAC CCTGACCTGG
TTTCGCTTTC TGGTTGCCCT GCTGATTACC TTTGTTATCC AGTATGTGAG CGGGAGCTTG
AAGCAGTTTG CATCTTTGAA GTCTCGAGAT TGGTTGAAGC TTGCTTTTTC TGGCGTCTTT
CTCATGTTCA ACTACGTCTC ATTTGTTTAC TCTTTAGCGT ATCTTGCGCC TGGGGCTGCA
CAGCTAAACT TTCAGACGGC TCCCTTTTTT CTAGCTTTCG GTGGCATGCT CTTTTTTAAA
GAGAGACTAA ATGCGGTTCA GATGGCCTGT TTTGCGACAT TAGCCTTAGG TATGTTGCTA
TTTTTTCATC CCTATTTAGA TTTTTCACAA TCGGACAATA GTGCTATCTG GATTGGAGTG
ATGATCATTC AATTCTCTGT GTGTTCCTGG ACCAGTTATG CTTTGCTGCA AAAATCACTG
CTGAAGAAGT TAGATCCCAA TAATATCCTG CTGTTTATCT ATGGTTTAGG CGTGTTAGTG
ATGGCGTTTT TCAGTGACTT TACTCAGTTT GGAGTGATGA CACTCAATGA GTGGTGGGTT
GCCATTTTTT GTGCCATTAA TACTTTGATC GCATATGGCT GTTTTGGGGC TTCGATGAAG
TATTGGCCGA CGCCGCAAGT GAGTGCCATG TTAGCGTTAA CGCCGGTGTT GAGTTTTAGT
GCTACCGCTT TAGTTGTCAG TTTAGGGTTA TGGCCTAATG CCTTTGTGAG TGATGAATTG
AATCTATTAT CTTTAAGCGG CATTGCCATT ATTATCTTGT CGGTGGCTTC TCTTCAGTTA
CTTCCTGTGA TGAAGAAGCG TAGGGAGAAG TATTCTTCGC TAAGTGTGAA TGAAAAGAGT
TGA
|
|---|
| Protein sequence | MQANFKLGFF FISTAVLFWG ILPIALKLSA SFIDPVTLTW FRFLVALLIT FVIQYVSGSL
KQFASLKSRD WLKLAFSGVF LMFNYVSFVY SLAYLAPGAA QLNFQTAPFF LAFGGMLFFK
ERLNAVQMAC FATLALGMLL FFHPYLDFSQ SDNSAIWIGV MIIQFSVCSW TSYALLQKSL
LKKLDPNNIL LFIYGLGVLV MAFFSDFTQF GVMTLNEWWV AIFCAINTLI AYGCFGASMK
YWPTPQVSAM LALTPVLSFS ATALVVSLGL WPNAFVSDEL NLLSLSGIAI IILSVASLQL
LPVMKKRREK YSSLSVNEKS
|
|---|
| |