| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0624 |
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| Symbol | metF |
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| ID | 6114858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 871549 |
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| End bp | 872439 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632110 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_001759015 |
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| Protein GI | 170724989 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTTA ATCATGCACA ACATTCAACG TCACTAAACC AGAGCTTAGC TGAGCTGAAT
GGCGATATTA ACGTTTCTTT CGAGTTTTTC CCTCCTGCAT CACCTGAAAT GGAGCAGTTA
CTCTGGAACT CTATACGACG CCTTGAGCCA CTGAACCCTA AGTTTGTTTC GGTAACCTAT
GGCGCCAACT CTGGAGTTCG TGACCGTACT CACGGTGTGA TTGAACGTAT TCAAAAAGAG
ACAGATCTGG TCGCTGCCCC GCACCTTACT TTAGTTGATG CCAGTGATGA GGAGCTTAAA
GAGTTAGCTA AGCACTACTG GAATTCAGGT ATTAAAGATA TTGTGGCACT GCGAGGCGAT
CTGCCTGAAG GAAGCCCAAA GCCGACTCGC TTTGCTAACG ACTTGGTAGG TCTACTGCGC
TCGGTAGCTG ATTTTGATAT CTCAGTCGCC GCGTACCCTG AAGTTCACCC TGATGCGCGT
AATGCTCAGG CCGATCTGAT TAATCTAAAA AAGAAGATCG ATGCAGGCGC CAATCGTGCT
ATTACCCAGT TTTTCTTCGA TGTTGAGTCT TACCTTCGTT TTCGCGACCG CTGTGTGACG
GCTGGTATCG ATGTTGAGAT CGTACCTGGC ATACTGCCAG TGACTAACTT TAAGCAGTTA
AAGCGTTTTG CTGGCATGAC CAATGTAGGT ATTCCAGGTT GGTTACATAA GCAGTTTGAA
GGCTTAGATG ATGATCCTGT GACTCGTCAG ATGGTAGGTG CCAACGTGGC GATCGACATG
GTCAAAGTCC TGTCCCGTGA AGGTGTTAAA GATTTCCATT TTTATACCCT AAATCGAGCT
GAACTCACTT ACGCTATCTG TCATACATTG GGTGTACGCC CAGGCAGGTA A
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| Protein sequence | MSFNHAQHST SLNQSLAELN GDINVSFEFF PPASPEMEQL LWNSIRRLEP LNPKFVSVTY
GANSGVRDRT HGVIERIQKE TDLVAAPHLT LVDASDEELK ELAKHYWNSG IKDIVALRGD
LPEGSPKPTR FANDLVGLLR SVADFDISVA AYPEVHPDAR NAQADLINLK KKIDAGANRA
ITQFFFDVES YLRFRDRCVT AGIDVEIVPG ILPVTNFKQL KRFAGMTNVG IPGWLHKQFE
GLDDDPVTRQ MVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPGR
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