| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0622 |
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| Symbol | |
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| ID | 6114856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 867319 |
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| End bp | 868485 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632108 |
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| Product | O-succinylhomoserine (thiol)-lyase |
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| Protein accession | YP_001759013 |
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| Protein GI | 170724987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAAC GTAAGTTAGC CACGATTGCC GTGCGTCAGG GGATTGAGTC CGATACCCAA
CATGGTGCCG TAGTACCGCC GATCTATCTT TCCACTAATT ACTCCTTCGA TGGGCATAAA
AACCCAAGAG ATTTTGATTA CAGTCGCTCA GGTAATCCAA CTCGCTCAAT TCTTGGCGAT
GCCATTGCAG GCCTTGAGAA AGGAGCCACT GGCGTCGTAA CCTGTACGGG AATGGCAGCC
ATCACTTTGG TCACTAGCTT GTTAGGTCCA GACGATCTGC TTGTAGTACC TCACGATTGT
TATGGTGGTA GCTACAGATT ATTCACTAAT TTGGCTAAAA AGGGTCAATT TAAGCTGGCG
GTGGTTGATC AAACTGACAG TCAGGCTTTA AGTGAGGCGA TAGCACTAAA ACCTAAGATG
GTTTGGCTTG AGACGCCATC GAATCCACTG TTAAGGGTGG TTGATATCGA GGCGATTGCG
CAAGCAAGTC ACGAGGTTGA AGCACTTGTG GTCGTCGATA ACACTTTCCT CTCTCCCATT
TTACAGCAGC CACTTCTTCT AGGGGCTGAT ATCGTGATCC ACTCAACGAC TAAATATATT
AATGGCCATA GTGATGTTGT AGGTGGCGCT GTAGTGGCGA AAGATCCAGA ACTTGGTGAG
TTGCTGCATT GGTGGTCAAA CACCTTAGGG CTGACAGGTT CGGCGTTTGA CAGCTATCTG
GCTCTACGTG GTCTTCGAAC CTTGCCTATC CGTATTAAAG AGCATCAAGC TAATGCTGAG
CGAGTGCTAG AGGTGCTGAC AAACAGTAGC GCCGTCGACA AGGTGTATTA TCCTGGGCTT
AAAGATCATC CCGGTCACGA GATTGCCGCT AAGCAGCAAA AAGGCTTTGG CGCTATGCTC
AGTTTCGAGT TAAAAGGCGG AGAGGCCGAG TTAGTTGCCT TTTTAGCGCA ACTTTCTGTG
TTTTCTGTCG CAGAAAGTTT AGGTGGGGTA GAGAGTTTAG TCGCGGTTCC TGCGACAATG
ACCCATAGAG CGATGGAGCC AGAGGCACGA GCCGAGGCAG GGGTTAAAGA GACCCTTATT
CGCCTCTCTG TCGGTATTGA AGATGCTGAT GATTTAGTTG CAGATATTCA AGCTGGGCTT
ACTGCTGCAT CTGCAGCCAG CTGTTAA
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| Protein sequence | MTERKLATIA VRQGIESDTQ HGAVVPPIYL STNYSFDGHK NPRDFDYSRS GNPTRSILGD
AIAGLEKGAT GVVTCTGMAA ITLVTSLLGP DDLLVVPHDC YGGSYRLFTN LAKKGQFKLA
VVDQTDSQAL SEAIALKPKM VWLETPSNPL LRVVDIEAIA QASHEVEALV VVDNTFLSPI
LQQPLLLGAD IVIHSTTKYI NGHSDVVGGA VVAKDPELGE LLHWWSNTLG LTGSAFDSYL
ALRGLRTLPI RIKEHQANAE RVLEVLTNSS AVDKVYYPGL KDHPGHEIAA KQQKGFGAML
SFELKGGEAE LVAFLAQLSV FSVAESLGGV ESLVAVPATM THRAMEPEAR AEAGVKETLI
RLSVGIEDAD DLVADIQAGL TAASAASC
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