Gene Swoo_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0598 
Symbol 
ID6114832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp844610 
End bp845767 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content51% 
IMG OID641632084 
Productsulphate transporter 
Protein accessionYP_001758989 
Protein GI170724963 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0659] Sulfate permease and related transporters (MFS superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATGCA AAAGCACATT TTTTAGTAGA TGTGATCAAC TCTCAGGTGA ACTCAGTGGA 
GCCTTCGCCG ATCTTGGTAC TTTTTTACCG CTAGTTTTAG GTCTTATTGC CTTAAACCAC
TTTTCTCCTC AAGGGATCTT CTTAGGTTTC GGCCTGTTTG CGCTCTTTAC CGCCTTCTAT
TATCGACGCC CGATCCCCGT GCAGCCGATG AAAGTGATCG CAGCCTTAGT TATCGCCCAA
GGCCTCACCC CAGGCATGCT ACAAGCGAGC GGCATGATGA TGGGAGCTAT CTTACTCCTA
CTCGCCTATA GCGGCGCGAT AACTTGGATG GCAAAGCAGC TCTCACCAGC AGTAAGTATC
GGCATTCAAC TCGCCATCGG TCTCCAGTTA ATCTGGATGG GTGGCCAGAT GATGAGTGAA
ACTTGGCTTA TTGGCATAAG CGCTTTTATC GCCCTCTTTG CCAGTAAGTT TATGCCTCTT
AGGTATCTAG CTATGCCACT CGTGCTCGCC CTTGGCATTA TCTGGCAGAT GAACAGCGGC
ATTGCCCCTA GCTTCGATCT TACCGGTCAC ACAAGCTGGC AACCCAGTTG GCCAAGTCTC
GATGAGTGGA CCTCGGCGGC GGGTCTTTTA GTTCTGCCGC AACTGGCACT GACCTTAACC
AATGCGGTGA TCGCCATCTC TGCGATGGCA AAAGATAAGT TTCCAGCAGA TAAGGTCAAT
GGTAAGGAGA ACTTCACACC TAAACGACTA GCCACCAGCT CAGGACTTGC CAACCTATTA
CTGGCTCCTT TTGGCGCCAC CGCCATGTGC CACGGTGCGG GTGGTCTTGC GGTGCAACAT
CACTTTGGTG CCAGAACCTG GATAGCTCCA ACTATCTTCG GTACAGCTTG TCTGCTTATC
GCCTTTAGCT GGGGAGATGG TATCGCCACC ATGTTATCCC TTATCCCGCT AGCGATACTT
GGCAGCATGC TTGCCATTGC TGGTACCCAA CTGGCTTGGT CAAAGCGATT AATCGACGGA
AAACCTTTCT GTATCTTCGT CATCCTTTCC ACCGCTGCCA TCTGCCTAGT CGTCAACACC
GCAGCAGGAC TCGCTGTTGG GGTGATATTG GAGATGGGAC GTCGACAGTG GAAACAGGTC
TCAAGCCTGA GACATTAG
 
Protein sequence
MTCKSTFFSR CDQLSGELSG AFADLGTFLP LVLGLIALNH FSPQGIFLGF GLFALFTAFY 
YRRPIPVQPM KVIAALVIAQ GLTPGMLQAS GMMMGAILLL LAYSGAITWM AKQLSPAVSI
GIQLAIGLQL IWMGGQMMSE TWLIGISAFI ALFASKFMPL RYLAMPLVLA LGIIWQMNSG
IAPSFDLTGH TSWQPSWPSL DEWTSAAGLL VLPQLALTLT NAVIAISAMA KDKFPADKVN
GKENFTPKRL ATSSGLANLL LAPFGATAMC HGAGGLAVQH HFGARTWIAP TIFGTACLLI
AFSWGDGIAT MLSLIPLAIL GSMLAIAGTQ LAWSKRLIDG KPFCIFVILS TAAICLVVNT
AAGLAVGVIL EMGRRQWKQV SSLRH