| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0578 |
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| Symbol | |
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| ID | 6114812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 816601 |
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| End bp | 819522 |
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| Gene Length | 2922 bp |
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| Protein Length | 973 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632064 |
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| Product | hypothetical protein |
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| Protein accession | YP_001758969 |
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| Protein GI | 170724943 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00554107 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000720229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCGTATAA CATTGAGATT GGAAACTTTA GATATTATGG ATGATGTTCA GATTAAGTGG
CGTAAGTTTA AAGCATGCAT AGCTCTACCT ATGGCGATGA TGAGTACTCA AGCACTTGCT
GATATCGGCG ATACCCCCGT TATTGGTGGC GTGTTTAATG CCAGTGAGAT AATGAGAGAT
CAAATCGTCT CCTCTTTGAG TGCATCCACT AAGCTGACTC GTGATATCAC ACTGTTTACC
ATCGCTGGTG TTTCTCTCGA TGTTTACATT CTCTCTCTTC CTCTGGACAG TAAGGTTAAA
GCCAGAGTTA TCGGCCAACT CAGCGACCCC ACTTATGCCA TTCCTTTGGG TCATTTTCTC
TACAGTTATT ACGACCGTTA TGGTGACATG AACACCCATG ATGAGTTTAA GTTGTACCTC
AATAGTCAAT ATACGCTGCA GCAACTAAAA GGGTTTGAAC ATAGCTTATA TCATGTGGGT
GAGGAGGCTG AGATAGAGGA GAAGGAGTCT GGTACTCAAG GTAATAGTGA AGGGTTAAAA
GCCGATAGTC AGTTTATCGC CTCTATGGTG ACTATCTATG ATGCCTTGGT TGAGATTGGT
CAATGGCAGA ACATGGATAC CTTGCCATCG ACTTATACTT ATCTCACCTC TTCAGCAGAA
GACCTTGAGT TAATAGATAA GATACAGCCG ATCATTATTA GTTTAATGGA CAAAGCCAGT
GGAGGGATGG AGCCTAGCGA GATGAAAACG GCTCTGCTTG GAATTATCGA AGATGGCAAG
CCTGAGCATA AACATAAAGT GAATAATAAA GCTCAGGCGT TAACCATCAC ACTCATCGAT
TTTGTTCGCC TAAACGTCCT CAAAGCCTAT CGTCAATTTA TCTATAAGCA GGAGCGGGAA
GAGGCCCTGC ATGCTTGGAT GTTGGATACC TTTGATGAGG ACAGCAATCA GTTAATGGTA
TTTCTCAGTT CACAGCAAAA ACGCCGTTAT GGGGTGCAGG TCGCCGTTGA TGGTCTGCAG
CAGGGGTTAC TTGAAGGGCT GGTGGATCAA GGTAAACCTT TTATTAAATA TGCAAACTCC
CTACATGAGT CTCGTGACAA ATTAAAACTT AAGGGGGAGG GGGTTAATCA GCCGGAGCAT
GAACAACAAG TTAAGTTTAT GAATCGCTTA GCCGAGCATG AGTACAAAGA TCCCAACTAC
CTGCCATTCT TTAAGCGCCT CTATCTTAAC CATCGAGACT CTATTACTCA GGTGGGGATC
TCATCCACAC CGACAATCAG CGTGCGAAAC CTACCTATCA TTAAAACTGG CGCCAAGGTT
TCTGGAGAGA GAGGAACTGG GATCCCCAAC TTTCACTTTG TCGACAGAGA GGATGATAGG
GCGTATTACT TTTTTGGTAA CGATGCGCTG CAACTGGACA GGTTAATGGA GAGTCAGGGC
GTTCAGACCA TGTTCGATCG TTTAGCTTAT CTCAATACCC TAAACTGCAA TGGACAATAT
GATTGGAATG CACACTCGAC CTACGATGGG CTCGTCAACC TTGGGTTTGG TGAAGTGCAG
CGAGATTACG GTGAGAAGCG TTGTCTTAGA GAGCTAACTG AGCGGGCTAA AGTGGAGGTG
AAGTTAAGGC ACTTTCGACA GGAGTTAATT GAGGATATAC AAGGCTATCA GGGGATCTTC
TTTCTTGATA TCGTCACTAA ACTCACCAAG AGGTGGAAGA TAGAGAAGGC GATCGCTGAA
CTGGCAAGTA TGGATGGACA AGGTATGCCT GATTTCACCT TGATCTATAA TCCTTGGCCG
GATCATTTTG CGCATTTTAC TGGGCCATTT AGTGATGAGA TCATCATGCC CACTGGGGAG
CTTAATCGGC TAGATCATTG GCTCGCCAAA ACAGAGCAGG TCTACAAAGA GGCTGGGATC
TATGATCAAA CCCTCTGGGG GATGGCTGGA GATCATGGTT TAACCCCTAT CTTCTATGCG
CTGAATCCTG AGAAACGTGT TTTTGAAGCA CTTTCAAAAG AGCAGGGATT TGAGATTGTG
GTAAAGAAGA TCTCCTCCGA TGAGGGCGAA GGCCCTAAGA TCACAAATGC ACTGAACTAT
TCTGGAAATC AAGCTGTTGA TGTAGTTGTC GCTTCTACAG CTGGTGGCAA CATGATGATG
GACTTTTTCA ATTCAAAAGC GGGATGGAAG TCGCAACCTG TTTACGAAGA GTTGACCCAA
TGGAGGCCGT TTAAGGGGGA TAAACCTGTC GATATCGTGG CTGAGTCAGC AGCTAGGTTA
TCAGAGTCTC TTGACTACAT GGTACTGCGT GAACGTCAGT GTAAAGTGGA TGATTGCAGG
GTACGTTTGG TGGGATACCG TGAAGGTGTG CGTCTCGATG AATTTGTTGA ACTTAAAGGG
GATAAGCTGT TTTATGCTAG CCACTCTGCT AGTGAACCAA GCTTGCTTGA TATCCAAACT
TTAAATCCTT ATCGTGTTCG CCCTACAGAG GCTGAATTTC AACATTACTT AGATTTAAAA
TCGCAATGTC TGCAGCAAGC CAAGGAGCAA GACAGTGCAA CGTGGTGCAG TGTAAAACAG
TGGCGTAAGT TGACGGCATT TACCCTAAGG CCCGACTCTG TTAATCAAAT AGCAAGGCTT
TATGAGGAGG ATAGAGCTGG CACAGTTAAT CTGTTTCCCA AAGCTGGGAT AGGATTTAAT
ACTAAAGTCC CTGGTCGCCA CGCTGGTGAA GATTACCTTG AGAAAGATGC CTTTATCGGT
TTTTGGGGCG CGCCAATAGG TGACGCAGCC ACACCATTAA CCATTGAAGA GAATGGCTCA
CTTGCACCAA CTATCTATGA ATACCTAACA GGTGAAACCC TTGTGCCCGG TGAGAATGGT
TGGGGGTATC CCTCTTTACT GGACAAGTTG GATATTCAAT AG
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| Protein sequence | MRITLRLETL DIMDDVQIKW RKFKACIALP MAMMSTQALA DIGDTPVIGG VFNASEIMRD
QIVSSLSAST KLTRDITLFT IAGVSLDVYI LSLPLDSKVK ARVIGQLSDP TYAIPLGHFL
YSYYDRYGDM NTHDEFKLYL NSQYTLQQLK GFEHSLYHVG EEAEIEEKES GTQGNSEGLK
ADSQFIASMV TIYDALVEIG QWQNMDTLPS TYTYLTSSAE DLELIDKIQP IIISLMDKAS
GGMEPSEMKT ALLGIIEDGK PEHKHKVNNK AQALTITLID FVRLNVLKAY RQFIYKQERE
EALHAWMLDT FDEDSNQLMV FLSSQQKRRY GVQVAVDGLQ QGLLEGLVDQ GKPFIKYANS
LHESRDKLKL KGEGVNQPEH EQQVKFMNRL AEHEYKDPNY LPFFKRLYLN HRDSITQVGI
SSTPTISVRN LPIIKTGAKV SGERGTGIPN FHFVDREDDR AYYFFGNDAL QLDRLMESQG
VQTMFDRLAY LNTLNCNGQY DWNAHSTYDG LVNLGFGEVQ RDYGEKRCLR ELTERAKVEV
KLRHFRQELI EDIQGYQGIF FLDIVTKLTK RWKIEKAIAE LASMDGQGMP DFTLIYNPWP
DHFAHFTGPF SDEIIMPTGE LNRLDHWLAK TEQVYKEAGI YDQTLWGMAG DHGLTPIFYA
LNPEKRVFEA LSKEQGFEIV VKKISSDEGE GPKITNALNY SGNQAVDVVV ASTAGGNMMM
DFFNSKAGWK SQPVYEELTQ WRPFKGDKPV DIVAESAARL SESLDYMVLR ERQCKVDDCR
VRLVGYREGV RLDEFVELKG DKLFYASHSA SEPSLLDIQT LNPYRVRPTE AEFQHYLDLK
SQCLQQAKEQ DSATWCSVKQ WRKLTAFTLR PDSVNQIARL YEEDRAGTVN LFPKAGIGFN
TKVPGRHAGE DYLEKDAFIG FWGAPIGDAA TPLTIEENGS LAPTIYEYLT GETLVPGENG
WGYPSLLDKL DIQ
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