| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0539 |
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| Symbol | |
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| ID | 6114773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 759489 |
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| End bp | 762710 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632025 |
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| Product | putative metal dependent phosphohydrolase |
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| Protein accession | YP_001758930 |
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| Protein GI | 170724904 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTCG AGACTAAGGT CAGCAATAAA CGTTTTACCA TTCGTTTCAC TGTGGTGGGG
ATCTTTATTT TAGCCACTAT TGTGACAGCT TCCATCGCCA TAGGTTTGCA GTATTACTTT
AGTAATACTA TGGCCACAGA ATCCGCCGTT AAGCTCTATA ATCTCACGGC TAAAAACACC
AGTAGTTATC TCACCCAAGT CGACAATCGA GCCACGAATA CAACACAGTT ACTCTCAAAC
TTTGATGATC TTGTGACTGA TGGGGCTTTT AACCCCGAAG CGCAGCAAGC TTTTGCTGAA
GTGATGCGAA CTAACTCTTT GTTTTATGCC ATCTACATCG GCATGCCCAA TGGCGATTTT
TATGAGTTAA TTAACCTAGA TGCCCATCCA ATAATCAGGT CCCAGCTCAA TGCATCTCAT
TTAGATCGTT GGGTGATCAT TACAATAAGT GGGGAAGGGG AGCTGCGCCA ACGAGATCAA
TCCTATCTCG ATGAACAGTT TAACTTGCGT GTGACCCACA GCGAGCACAG TGAATACGAT
GCGAGTGTCA GGCCTTGGTT TGTTGGTGCT AATACTGAAT CAGTCTCGAA AACAGAGCCC
TATCTATTCC AGCATCTGCA ATCACCGGGT CAAACCTATT CCATAAAGTT GGCAGAATCT
GGTGCTGTGC TCGCCTTAGA TATCGCATTG TCGACTCTGT CTGATTTTCT GGTTATGCAG
GGGGAGGACG AGAGGGAAGC CGGTATCCAT GAGAAGATCT ACCTCTATAA AGAGAGCGGC
GAACTGATTG CATCAAACCA GATACAGAAA CGTGGCGTTG AGATCCCAGA GTCCAGAGAG
CTAAAACTGA GCAGTAAACA AAGAGATCTA GTTGCAGCAA CTCAACCTCT TTTAGTCTCC
AATGAAACCG ATTGGGCCCC CATCGATTTT GCCATCTCTG GTATGCCGCA AGGGTACAGT
ATCGATCTGC TTAATCTGAT CTCAGAGATG ACTGGGCTTC GTCTACGCTA TATCAATGGC
TTTAGTTGGA GCGAGTTAAC GCAAAACTAT AAAGCCCATG AGCTAGATAT GTTGCACTCA
GTGCTAAAAA CCGATGAGAC TCGTTTACTT GGTGAGTTTA GTGCCCCTTT TCTTGAGCTG
CCTTTTGCAC TTGTCACTCT GCCAGGTATC GCGCCAATTA CTCACATTGA GCAGCTAAAT
GGTAAACAGT TGGCGATACC CGTTGGCTGG TCGATTATAG AGGTTATTAG AAAAAACTAT
CCCCAGATAG AGATTATTGA GATGGCTTCG ACCTATGCAA TACTGCACGC GGTTGAGGAG
GGAGAGGTGT TTGCTGCGCT AGATAGCAGC ATCATATTGC ACTACACGGC GAATCAGTTT
TTTGTTGAAG CTATTCAGTA CCATGAACAG CTGGACTTCT CTCCTGTAGA GGTCGATACC
GGCCTACATA TTGTGATGCC GGCTCAAGAG CAAGCTGTGA TGGAGGTGAT TAATTTGGCT
CTTGCTAACA TTACACCTGA GCAAACTCTG GCGTTAAGGG CTAAATGGTT TGGAGAGGGA
GATAAGAAGA CCTTGTCGAC ACAGGGAACC GTTCCTTTTG AGGCACTGAT TGAGTTAGCA
GCTTCGCCAA ATGAGCAGAA AAGATTAATT CAACGTGAGC TTAATGGGGT TGAAGAGTTT
ATCTACGTGA CACCCATTGG TGGTCGCTCT TCTGGAGAGA AAGAGTATTT AGCGATAGTT
GTGCCTAAAC AGCAGCTATT AGCGGCAAGC ATCGAAAAAG TGCTGCAGTC TATTTTTTTC
ACCAGTATCT GTTTGTTGTT GATTCTGCCT GTCTCTTGGT TATTTTCATC CCCTATCATT
CGCCCCATTA AGCTACTAGC TATTGAAAAT GAGAAGATAA AAAATCGTCA GTATGATGAA
GTGCGCAATG TCGACTCCAA TATCTCAGAG CTGGATGAGT TAGCAACCTC CATGATGGAT
ATGTCTGTCT CGATTAAACA GCATGAGGAT AACCAGAAGG CCTTAATGGA GTCATTTATC
AAATTAATAG CCCAAGCTAT TGATGATAAA TCTCCCTATA CAGCAGGGCA CTGTAACCGT
GTACCTGAGC TTGGTTTGAT GTTAGTGGAA GCTGCACAGA TATCTGAGCT GGCACCCTTT
AAGGATTTTA AGTTTAATTC AGAAGATGAG CACAGAGAGT TCAGAATTGC GGCTTGGTTA
CACGACTGTG GCAAGATCAC AACGCCTGAG TATATTGTCG ATAAGGGAAC TAAGCTTGAG
GCGGTTTATA ACCGTATTCA TGAGGTCAGG ATGCGCTTTG AGGTGCTGTG GCGCGACGCA
GAGATAGAAT ACCTTAAGCG AGTATCTTCT GAGGTGAGCT CTTGTGAAAA TGGCCCGAAC
GAGCTTCTTC TTGCCGAGCT TGCTCATAAA CGAGAGCAGT TAATTGAGGA CTTTGAATTT
ATCGCTAACG CCAATGTTGG CGGAGAGTTT ATGGGCCAAG AGGCAAAAGA TCGTCTTGCT
CAGCTTGCTA ATATCACTTG GGAGCGACAT TTCGACGACA GACTCGGTCT CTCGCCTGTT
GAAGAGCTTA ATCTTAGTAC CCAAGAGGGC GAAATAAGTT ACCCAGTGAC TGAGTCGCTA
TTAAGTGACA GAGCTGAACA TATTATCAAG CGAGTTAATA AAGTGGAGTT TGACCCTAAG
TTTGGTATCA AAATGGCTAT TCCAGAGCAT CAATATAACT TAGGTGAGCT TTATAACCTC
TCTATCTCCA GAGGCACTTT GACCGCAGAA GATAGATTTA AGATTAATGA GCATGTGACC
AGCACCATTA AGATGTTGGA AAACCTTCCA TTCCCACCAG AGCTTGCTCG TGTGCCTCGT
TATGCCTCGA CCCATCATGA AACCTTAAAA GGGACGGGCT ACCCACGAAA GCTAAGCGCA
GATGATCTCT CAATACCTGA GCGTATCTTA GTCGTTGCCG ATATCTTTGA GGCCTTGACC
GCCGCCGATA GGCCCTACAA AAAGGCTAAG CCTCTTAGTG TTGCCATCGA TATCTTGCAT
AAGATGGCAT TGGATGAACA CTTAGATATG GATATTTTTA GACTGTTTCT CTCAAGTGGG
ATCTACCTAG ACTATGCCCA TAAGTTTCTT GATGTTAAAC AGATTAATGA AGTTGATGTG
GCCAAATATT TAAACCAAGA GCCGATGAAA AAGAGTGCGT AA
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| Protein sequence | MGVETKVSNK RFTIRFTVVG IFILATIVTA SIAIGLQYYF SNTMATESAV KLYNLTAKNT
SSYLTQVDNR ATNTTQLLSN FDDLVTDGAF NPEAQQAFAE VMRTNSLFYA IYIGMPNGDF
YELINLDAHP IIRSQLNASH LDRWVIITIS GEGELRQRDQ SYLDEQFNLR VTHSEHSEYD
ASVRPWFVGA NTESVSKTEP YLFQHLQSPG QTYSIKLAES GAVLALDIAL STLSDFLVMQ
GEDEREAGIH EKIYLYKESG ELIASNQIQK RGVEIPESRE LKLSSKQRDL VAATQPLLVS
NETDWAPIDF AISGMPQGYS IDLLNLISEM TGLRLRYING FSWSELTQNY KAHELDMLHS
VLKTDETRLL GEFSAPFLEL PFALVTLPGI APITHIEQLN GKQLAIPVGW SIIEVIRKNY
PQIEIIEMAS TYAILHAVEE GEVFAALDSS IILHYTANQF FVEAIQYHEQ LDFSPVEVDT
GLHIVMPAQE QAVMEVINLA LANITPEQTL ALRAKWFGEG DKKTLSTQGT VPFEALIELA
ASPNEQKRLI QRELNGVEEF IYVTPIGGRS SGEKEYLAIV VPKQQLLAAS IEKVLQSIFF
TSICLLLILP VSWLFSSPII RPIKLLAIEN EKIKNRQYDE VRNVDSNISE LDELATSMMD
MSVSIKQHED NQKALMESFI KLIAQAIDDK SPYTAGHCNR VPELGLMLVE AAQISELAPF
KDFKFNSEDE HREFRIAAWL HDCGKITTPE YIVDKGTKLE AVYNRIHEVR MRFEVLWRDA
EIEYLKRVSS EVSSCENGPN ELLLAELAHK REQLIEDFEF IANANVGGEF MGQEAKDRLA
QLANITWERH FDDRLGLSPV EELNLSTQEG EISYPVTESL LSDRAEHIIK RVNKVEFDPK
FGIKMAIPEH QYNLGELYNL SISRGTLTAE DRFKINEHVT STIKMLENLP FPPELARVPR
YASTHHETLK GTGYPRKLSA DDLSIPERIL VVADIFEALT AADRPYKKAK PLSVAIDILH
KMALDEHLDM DIFRLFLSSG IYLDYAHKFL DVKQINEVDV AKYLNQEPMK KSA
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