| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0523 |
|---|
| Symbol | |
|---|
| ID | 6114757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 739313 |
|---|
| End bp | 739711 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641632010 |
|---|
| Product | twin-arginine translocation protein, TatB subunit |
|---|
| Protein accession | YP_001758915 |
|---|
| Protein GI | 170724889 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.926696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACG GTATTGGCTT TATGGAACTG CTGTTGATCG GTATTTTAGG GCTAGTTGTG
CTTGGCCCTG AAAGACTTCC GGTTGCAGTT CGCTCAATAA CAGGCTGGAT CCGAGCCATG
AAACGTATGG CTAACTCAGT TAAAGATGAG CTTGAGCAGG AACTCAAAAT TGAGCAACTG
CATTCAGATT TGAAAAAAGC TGAGAATCAA GGTCTTAAAG ATCTTTCACC TGAGTTGCAG
GATTCAATCG ATCAATTAAA AGAAGCGGCT CAGTCTGTTA ATCGTCCTTA TAAGATAGAA
GAAACACCTT CGGCCAGCAG CTCTGCGCCA TCGGAAAGTA CTCCTTCAGA GGCTCCCACA
GCTGAGGTTA GCGCTAACCC AGACAAATCT AACAGGTAG
|
|---|
| Protein sequence | MFDGIGFMEL LLIGILGLVV LGPERLPVAV RSITGWIRAM KRMANSVKDE LEQELKIEQL
HSDLKKAENQ GLKDLSPELQ DSIDQLKEAA QSVNRPYKIE ETPSASSSAP SESTPSEAPT
AEVSANPDKS NR
|
|---|
| |