| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0522 |
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| Symbol | |
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| ID | 6114756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 738539 |
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| End bp | 739309 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632009 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001758914 |
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| Protein GI | 170724888 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.741843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCAAC AGCAGCCTCT TATTAGTCAT TTACTTGAAC TACGAACCAG ATTACTCCGA
GCCATCGCCA GTGTGATATT GGTGTTTGCC TGTATGGCCT ATTGGTCTAA TGATATCTAC
CATTATGTGG CAACCCCACT TATGGATGTG ATGCCTGAAG CCAGTAGCAT GATCGCGACC
GATGTTGCCG CACCCTTTTT CGCTCCGTTT AAGCTAACAC TGGTTCTGGC TTTTTTCATC
GCTATCCCCT ATGTCCTATT CCAGATCTGG TCTTTTATCG CACCTGGTCT GTATAAGCAC
GAAAAGCGTT TAATGATGCC GCTGCTTGCC AGCAGTACAC TGCTGTTCTA CCTAGGTATA
GCCTTTGCTT ACTATGTTGT TTTCCCTGTT GTTTTCGGCT TCTTTACTAG CGTTGCACCA
GAGGGAGTAC AGGTCGCTAC CGATATCACC AGTTACCTAA GCTTTATCCT TAAGCTCTTC
TTTGCCTTTG GTTTAGCCTT CGAGATCCCA ATCGCCGTAG TATTACTATG CTGGGCTGGT
GTAACTACAC CTGATGACCT AAAAGCGAAA CGCCCCTACA TCATAGTCGG TGCCTTCGTT
ATTGGCATGT TATTAACTCC TCCAGACATC ATTTCTCAAA CCATGTTAGC GGTTCCAATG
CTGATATTAT TTGAAGGGGG ATTGATTGCT GCTCGTTTCT ACAGTAAAAA GGATGAAGAA
GATGAAGACG AGCAAGAAAA ACAGGATGAA CCTGGCCAAG AAGCTAAGTA A
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| Protein sequence | MSQQQPLISH LLELRTRLLR AIASVILVFA CMAYWSNDIY HYVATPLMDV MPEASSMIAT
DVAAPFFAPF KLTLVLAFFI AIPYVLFQIW SFIAPGLYKH EKRLMMPLLA SSTLLFYLGI
AFAYYVVFPV VFGFFTSVAP EGVQVATDIT SYLSFILKLF FAFGLAFEIP IAVVLLCWAG
VTTPDDLKAK RPYIIVGAFV IGMLLTPPDI ISQTMLAVPM LILFEGGLIA ARFYSKKDEE
DEDEQEKQDE PGQEAK
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