Gene Swoo_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0518 
Symbol 
ID6114752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp734238 
End bp735254 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content46% 
IMG OID641632005 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001758910 
Protein GI170724884 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.151738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATTA TTACCAGTGC CTTCCCACAA CGCAGAATGC GTCGCATGCG CAAACATGAT 
TTTAGCCGTC GTTTAATGGC TGAAAATCAA CTTTCGGTAA ACGATCTTAT CTACCCTATG
TTTGTTTTAG AAGGTAATAA TAGAACTGAG CAGATAGCTT CAATGCCTGG CATAGAGCGC
TACTCAATCG ACCTACTGCT TAAAGAAGCA GAGGAGATTG TGAAATTAGG GATCCCACTT
ATCGCCCTAT TTCCAGTAAC GCCTGCAGAG AAGAAAACCT TGCTAGCAGA AGAAGCTTAC
AATGCAGATG CGCTAGCTCA ACGTGCCGTT CGTGCACTCA AGGAAGCATT TCCTGAACTA
GGGGTCATGA CAGATGTCGC ACTAGATCCT TTCACCACGC ACGGTCAAGA CGGGATCATC
GATGAAGATG GCTATATTCT TAACGACATC ACCACAGAGA TCTTGGTAAA ACAAGCACTA
TCTCATGCAG AAGCTGGTGC CGATATCGTC GCACCATCGG ATATGATGGA TGGCCGTATT
GGGGCGATTC GTCAAGCATT AGAGGAAGCT GGACACGTTA ATACCCAGAT CATGGCTTAC
TCAGCTAAAT ATTCATCGAA TTATTATGGT CCTTTCCGTG ATGCAGTAGG TTCAGCTGGT
AACTTGAAAG GTGGCAATAA GCACAGCTAC CAGATGGATC CAGCCAACAG TGATGAGGCG
TTACACGAAG TTGCCCTCGA TATCCAAGAA GGTGCTGATA TGGTCATGGT TAAACCAGGC
ATGCCTTACC TTGATATCGT CACCCGCGTA AAACGTGAAC TCGCCGTGCC TACCTTTGCT
TATCAGGTCA GTGGTGAATA CGCCATGCAC ATGGCAGCCA TCGAGAATGG TTGGTTATCA
GAAAAAGCTA TTGTGATGGA ATCACTGCTT TGCTTTAAGC GAGCAGGTGC CAACGGTGTA
CTAACCTACT TTGCTAAACG TGCCGCTCAA TGGCTCAAAG AGGAGCAGGC AAAGTAA
 
Protein sequence
MNIITSAFPQ RRMRRMRKHD FSRRLMAENQ LSVNDLIYPM FVLEGNNRTE QIASMPGIER 
YSIDLLLKEA EEIVKLGIPL IALFPVTPAE KKTLLAEEAY NADALAQRAV RALKEAFPEL
GVMTDVALDP FTTHGQDGII DEDGYILNDI TTEILVKQAL SHAEAGADIV APSDMMDGRI
GAIRQALEEA GHVNTQIMAY SAKYSSNYYG PFRDAVGSAG NLKGGNKHSY QMDPANSDEA
LHEVALDIQE GADMVMVKPG MPYLDIVTRV KRELAVPTFA YQVSGEYAMH MAAIENGWLS
EKAIVMESLL CFKRAGANGV LTYFAKRAAQ WLKEEQAK