Gene Swoo_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0513 
Symbol 
ID6114747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp727434 
End bp727760 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content41% 
IMG OID641632000 
Productthioredoxin 
Protein accessionYP_001758905 
Protein GI170724879 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00420648 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGACA AAATAGTACA TCTAAGTGAC GACAGCTTTG AAAATGACGT AATCAACTCA 
ACACTACCTG TAGTCGTCGA CTTTTGGGCT GAGTGGTGTG GACCATGCAA AATGATTGCG
CCTATCTTAG ATGACGTTGC TGAAGAGTAC GAAGGCAAAG TGACTATCGC CAAGATGAAT
GTTGACCAGA ACAGTGTTTC ACCTGCTAAA TATGGTGTTC GTGGTATTCC AACACTACTG
ATTTTCAAAA ATGGTGAACT TGCGAGTACT AAAGTTGGCG CACTTTCAAA AACTCAACTT
AAAGAGTTCA TTGACGCACA ACTATAA
 
Protein sequence
MSDKIVHLSD DSFENDVINS TLPVVVDFWA EWCGPCKMIA PILDDVAEEY EGKVTIAKMN 
VDQNSVSPAK YGVRGIPTLL IFKNGELAST KVGALSKTQL KEFIDAQL