| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0510 |
|---|
| Symbol | frdB |
|---|
| ID | 6114744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 724102 |
|---|
| End bp | 724833 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641631997 |
|---|
| Product | fumarate reductase iron-sulfur subunit |
|---|
| Protein accession | YP_001758902 |
|---|
| Protein GI | 170724876 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000519378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGG GTCGTACACT AACCTTTAAT ATCTTCCGTT ATGATCCACA GGTGAGTGGT
GATAAACCTA AGATGGTTAA ATATCAGATT GAAGAGACAC CTGGGATGTC GGTGTTTATC
GCACTGAACC TACTGCGTGA ACAGCAAGAC AGCTCACTGC AGTTTGATTT TGTTTGCCGA
GCTGGGATCT GCGGAAGTTG CGCTATGGTG ATCAACGGTT TCCCGACGTT GGCTTGCCGT
ACATTAACCA GCAAATATCC CCAAGGGGAG ATCACCTTGA TGCCGCTACC AGGTTTTGAG
TTGATTGGCG ACCTTTCGGT TAATACCGGT AAATTTATGC GTGAACTGGC TGAGCGTCTA
AAGCTGTGGC TCCACCCAGA TCAAGATGAT GTGGATGTGC ACAGATTAGA AGCACCTATG
GCCCCGGAGG AGGCAGCTAG ACTCTACGAG TTAGAGCGCT GTGTCGAATG CGGTGTGTGT
GTGTCAGCTT GTGCAACTAA GCAGATGCGT GAAACCTTTG TTGGCGCCGT TGGCATGATG
AAGTTAGCGC GTTTCGAGCT CGATAGCCGC GATACGAGAA GTGTGGAAGA TTTCTACCAC
GTGATCGGTA ATCAAGATGG CGTATTTGGC TGTATGACCC TACTAGGTTG TCAGGACAAC
TGCCCGAAAG ATCTGCCTCA TATGCAGCAG ATAGCGTATC TGCGCCGTAA GATGGCGGTT
GCGCTGGTTT AA
|
|---|
| Protein sequence | MSQGRTLTFN IFRYDPQVSG DKPKMVKYQI EETPGMSVFI ALNLLREQQD SSLQFDFVCR
AGICGSCAMV INGFPTLACR TLTSKYPQGE ITLMPLPGFE LIGDLSVNTG KFMRELAERL
KLWLHPDQDD VDVHRLEAPM APEEAARLYE LERCVECGVC VSACATKQMR ETFVGAVGMM
KLARFELDSR DTRSVEDFYH VIGNQDGVFG CMTLLGCQDN CPKDLPHMQQ IAYLRRKMAV
ALV
|
|---|
| |