Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0509 |
Symbol | |
ID | 6114743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 722081 |
End bp | 724105 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641631996 |
Product | fumarate reductase flavoprotein subunit |
Protein accession | YP_001758901 |
Protein GI | 170724875 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.745873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000923774 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAAACTGA TATATACGGA TTCTTTGGTG GTCGGCGCTG GTTTAGCGGG CTTGCGGGTC GCGATAGCCT CGAAAGAGCG TGGGTTAGAT ACGGTCGTCC TGTCACTGAT CCCTGCTAAA CGTTCCCACT CAGCAGCTGC TCAAGGCGGC ATGCAGGCGA GCTTAGGCAA TACCATTAAG GGGATGGGGG ACGACGAAGA TGTCCACTTT CAAGATACTG TAAAGGGTTC TGACTGGGGC TGCGATCAAG ATGTCGCGCG TATGTTTGCT CACTGTGCGC CAAAAGCGGT ACGTGAACTC ACCAACTGGG GAGTGCCATG GACTCGGGTG ACTAAAGGGC CACGTCAGGT GGTGGTTAAT GCCGAGAAGG TCACTATCGA AGAGGCGGAA GAGGCTCATG GACTCATTAA TGCCCGTGAC TTTGGTGGCA CTAAAAAGTG GCGTACCTGC TACACGGCTG ATGGTACAGG GCACTCGCTG CTTTATGCGG TGGATAATAA GGCTATCTCG TTAGGTATTC CCGTGCATGA ACGGGTCGAA GCTCTCTCTA TTATTCATGA TGGTAAGCGT TGCCAAGGCG TGGTTGCACG CTGTTTAATC ACAGGTGAGT TAAGGGCATA TATTGCTAAA TCCACCACGA TTGCCACCGG TGGTTATGGC CGCATTTATG AAGTCTCAAC CAATGCCATT ATCTGTGAAG GGATAGGCCA GGCGCTCGCG CTGGAAACTG GTGTCGCTAA GCTTGGCAAT ATGGAAGCGG TGCAGTTTCA TCCAACGGCT ATTGTGCCTG TTGGGATCTT AACGACAGAG GGTTGTCGTG GTGATGGTGG TCTGCTGCGT GACAAAGATG GTCACCGTTT TATGCCAGAT TATGAGCCGG AGAAAAAGGA GCTTGCCTCA CGTGATGTAG TGTCTCGTCG AATGACCGAG CATATGCGTA AAGGTAAAGG TGTCGACAGC CCTTATGGCC CACATCTATG GCTCGATATT ACCTTGCTTG GACGTAAACA TGTGGAGACC AATCTGCGTG AGGTTAAGGA GATCTGTGAG AATTTCTTAG GGATAGATCC CGCTAAGGAT TGGATCCCAG TGCGTCCGAC TCAGCACTAC TCAATGGGCG GTATTCGAAC CGATAAGACA GGACAAAACC CACAGCTTAA AGGTTTGTTT AGTGTCGGCG AAGCGGCATG TTGGGATATG CATGGTTTTA ATCGGCTCGG CGGTAACTCC CTAGCGGAGA CCGTTGTTGG CGGGATGATT ATCGGTAAAT ATGTTGCCGA TTTTTGTCAG GAAAACAGCT TAGAGATCGA CACCGGGTTA GCTGAGTCTT TTGTCGAGAA GCTAGGTAGC GAAATTGATG AGCTTATCGA CGGTGACGGC ACGGAAAGTC CATTTGCGCT TAGGAAAGAG ATGGAGCGTG TGATGATGGA CTATGTGGGG ATCTTCCGTA ACGGTCCTGA GCTTGAAAAA GCGGTAACAG AGCTTCAGGC ACTACTAAAG CGCTCACGTA ACATTGGTCT TAAATGCAAA AAGCGTCACG CAAACCCTGA GCTAGTTGAG GCGTTAAGAG TGAAGCGTAT GCTCAAAGTT GCTCTGACCG TCGCTTGTGG CGCGGCAGCA CGAACAGAGA GTCGCGGAGC CCATGCTCGT GAAGACTTCC CTCAGCGTAA CGATAAAGAT TGGCTAAACC GCACTTTGGC AAGTTGGCCA GATGAGCATG CACTCTCTCC TGAGCTGAGC TATGAGCAGC TTGATGTGAT GAAGATGGAG TTGCCACCGG GATACCGAGG TTACGGCATT AATAATGCGA TAGCCCATCC TGATACTGAG AAGCGCGAGC ATGAGATCAC TGAAATTTTA AGTCAACTTG GTGATGATGC CGATCGCCAT CAGCGTCAGC ATGCCTTGAT GCCATTTGAA GTGCCTGAAT CATTGATGCC TAAGAATGAA CGGCTGTGTG ACACATTAGA TAGACCTACT CCCCCTGTAG TGGGTGAAGA GTCCGTAGGA GAGCAAGCGT TATGA
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Protein sequence | MKLIYTDSLV VGAGLAGLRV AIASKERGLD TVVLSLIPAK RSHSAAAQGG MQASLGNTIK GMGDDEDVHF QDTVKGSDWG CDQDVARMFA HCAPKAVREL TNWGVPWTRV TKGPRQVVVN AEKVTIEEAE EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAVDNKAIS LGIPVHERVE ALSIIHDGKR CQGVVARCLI TGELRAYIAK STTIATGGYG RIYEVSTNAI ICEGIGQALA LETGVAKLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGHRFMPD YEPEKKELAS RDVVSRRMTE HMRKGKGVDS PYGPHLWLDI TLLGRKHVET NLREVKEICE NFLGIDPAKD WIPVRPTQHY SMGGIRTDKT GQNPQLKGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI IGKYVADFCQ ENSLEIDTGL AESFVEKLGS EIDELIDGDG TESPFALRKE MERVMMDYVG IFRNGPELEK AVTELQALLK RSRNIGLKCK KRHANPELVE ALRVKRMLKV ALTVACGAAA RTESRGAHAR EDFPQRNDKD WLNRTLASWP DEHALSPELS YEQLDVMKME LPPGYRGYGI NNAIAHPDTE KREHEITEIL SQLGDDADRH QRQHALMPFE VPESLMPKNE RLCDTLDRPT PPVVGEESVG EQAL
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