Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0503 |
Symbol | |
ID | 6114737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 714927 |
End bp | 717401 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641631990 |
Product | EcoEI R domain-containing protein |
Protein accession | YP_001758895 |
Protein GI | 170724869 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000156579 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0688429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA ATAAAGCAAA ACTGACTGAA ACCGATATCA TCACCAAATT CATCATGCCA GCGATTAAAG ATGCGGGCTG GAATGATATG ACGCAAATTC GCCAAGAGGT GAAACTGCGC GACGGTAAGG TCATTGTGCG TGGCCAACTC GGTGTGCGCA AAACCGTAAA GTCTGCTGAT ATTGTGCTTT ATCACAAACC AAGCATGCCA CTTGCTGTGA TTGAGGCTAA AGCTAACAAA CATGAAGTAG GCAAAGGCAT GCAGCAAGGG CTCGATTATG CACGCTTGCT TGAGGTACCT TTCATCTTTG CCTCTAACGG TGATGGCTTT ATCTTTCACG ACAAAACCCA TGCCGTCACA AACAGTCAAG GCACATCAGA AGCTCACTAC CTAGAATCCG AAATCCGCCT TGAGGACTTC CCATCACCAC AAGAGCTCTG GGCCAAGTAT TGCGCTTGGA AAGGCTACAC CGAAAAGCAG CTACCCATTA TCAATCAAGA ATACTATGAC GATGGTAGCG GTAAGCATCC TCGTTATTAT CAACTGCAAG CCATCAACAA GACCGTAGAA GCAATATCAT CAGGTAAAGA CCGTGTATTG CTGGTCATGG CAACAGGCAC AGGTAAAACT TACACGGCGT TTCAAATCAT CTGGCGCTTA TGGAAGTCTC GCGCTAAAAA ACGCATTCTA TTCCTAGCCG ACCGTAATAT CTTAGTCGAC CAAACTCGCA TAAATGACTT TCAACCGTTC GGTCAATCCA TGACTAAGAT AACCGGCAGA ACCGTTGACC CTTCATACGA GATACACCTC GCACTCTATC AAGCCTTAAC TGGCCCAGAA GAGAGCCAGA AAGCCTTTAA GCAAGTAGAC CCAGACTTCT TTGACTTAAT CATTATCGAC GAGTGCCATC GCGGTAGTGC CTCTGAAGAC AGCGCATGGC GTGAGATTCT AGAGTATTTC AAAAGTGCAG CTCAAGTAGG TTTAACGGCG ACCCCTAAAG AAACGACTGA AGTATCAAAC TCAGACTACT TTGGTGATCC GGCTTATACC TATTCCCTTA AAGAAGGTAT TGAAGACGGC TTCTTAGCAC CCTATAAAGT GGTGCGCGTA GATATTGATG TTGATCTACA AGGCTGGCGA CCAACAAAAG GCCAAATAGA TAATCAAGGT GAGGTAATAG AAGACCGTAT CTATAACCAA AAAGACTTTG ACCGCACCAT GGTGATTGAT GAGCGGACTC AGCTGGTGGC TGAGACGATA ACCAACTACC TAAAGCGTAC AGACCCAATG GCAAAGACCA TTGTATTTTG TAACGACATC GACCACGCCG AACGCATGCG CCGTGCTATC GCCAACCTCA ATCCAGAGCA AATGGCGAAG AACGATAAGT ACGTGATGAA AATCACTGGT GATGATGAGC TAGGTAAAGC ACAGCTTGAT AACTTCATCA ACCCTAAAAA ACCTTACCCT GTCATTGCCA CTACTTCAGA GCTGATGACC ACAGGTGTCG ATGCTAAAAC CTGTAAGCTG GTGGTACTGG ATCAAAACAT TCAGTCAATG ACTAAGTTTA AACAGATCAT TGGTCGCGGC ACCCGTATCG ATGACAGATA CGGCAAGTTG TGGTTCACCA TCTTAGACTT CAAAAAGGCT ACCGAACTGT TTGCCGATGA GCGCTTTGAT GGTACGCCAG AGAAGGTCTT AGTCGTTACC CCTACAGATA TAGAAGATGA CGATACTGAC ATTGATGGCA CAGATTCGAT TGATGACCCA AGTGATGAAG ATAATCCATT CGATGATGGT GAGCTTGGTG GCGATAGCAG TAATAATCAA CCCGATGGTA ATGGCGATGG TGCTCAAACA GGTGAAGGTG AATGGACAGA CGATGAAACT CGTAAAGTAG CCAAATACCG AGTCTCGGGT GTAAGCGTTA GTAAAGTTGC AGAGCGTGTG CAGTACTACG ATAGCGACGG CAAGTTAGTT ACCGAGTCTT TCAAAGACTA CACTCGCAAA ACCATGGCTA AGCAGTTCAG CTCTCTCGAT GAATTCGTAA AGCGCTGGAA TGATTCTGAC CGTAAACAAG CCATCATCGA TGAGCTCGCA CAAGAAGGCA TTATCTGGGC CGCACTTGAA GAAGAGGTTG GCAAAGATAT GGATCCATTC GACATGATCT GTCATGCGGT ATACGACCAA CCACCACTAA CGCGTAAAGA ACGTGCAAAT AACGTTAAAA AGCGTAATTA CTTCACCAAA TACTCTGACA CAGCCCAAGC AGTATTACAG AATTTACTGT TAAAATACGC CGATGTTGGG GTGCAAGAAA TTGAATCAAT GCAGGTGCTC AAAGTACAAC CCTTTAACGA GATTGGCAGC CTCAGTGAAA TCGTTAAAAA AGGCTTTGGT GGTAAAAAAG AGTACGAGCA AGCGATTAGC GAATTGGAAG CTGAGATTTA TCAGCTCCAC CAGCAATCAG CTTAA
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Protein sequence | MSINKAKLTE TDIITKFIMP AIKDAGWNDM TQIRQEVKLR DGKVIVRGQL GVRKTVKSAD IVLYHKPSMP LAVIEAKANK HEVGKGMQQG LDYARLLEVP FIFASNGDGF IFHDKTHAVT NSQGTSEAHY LESEIRLEDF PSPQELWAKY CAWKGYTEKQ LPIINQEYYD DGSGKHPRYY QLQAINKTVE AISSGKDRVL LVMATGTGKT YTAFQIIWRL WKSRAKKRIL FLADRNILVD QTRINDFQPF GQSMTKITGR TVDPSYEIHL ALYQALTGPE ESQKAFKQVD PDFFDLIIID ECHRGSASED SAWREILEYF KSAAQVGLTA TPKETTEVSN SDYFGDPAYT YSLKEGIEDG FLAPYKVVRV DIDVDLQGWR PTKGQIDNQG EVIEDRIYNQ KDFDRTMVID ERTQLVAETI TNYLKRTDPM AKTIVFCNDI DHAERMRRAI ANLNPEQMAK NDKYVMKITG DDELGKAQLD NFINPKKPYP VIATTSELMT TGVDAKTCKL VVLDQNIQSM TKFKQIIGRG TRIDDRYGKL WFTILDFKKA TELFADERFD GTPEKVLVVT PTDIEDDDTD IDGTDSIDDP SDEDNPFDDG ELGGDSSNNQ PDGNGDGAQT GEGEWTDDET RKVAKYRVSG VSVSKVAERV QYYDSDGKLV TESFKDYTRK TMAKQFSSLD EFVKRWNDSD RKQAIIDELA QEGIIWAALE EEVGKDMDPF DMICHAVYDQ PPLTRKERAN NVKKRNYFTK YSDTAQAVLQ NLLLKYADVG VQEIESMQVL KVQPFNEIGS LSEIVKKGFG GKKEYEQAIS ELEAEIYQLH QQSA
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