| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0497 |
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| Symbol | |
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| ID | 6114731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 705004 |
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| End bp | 706320 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641631985 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001758890 |
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| Protein GI | 170724864 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTAC TCGATATTTA TATGAATGGC TATCTGGTGG GGGAGCTCAC CAAGTCGACA
ACAGGTTCTC ACTTGTTTGA GTACGCACCG CAGTGGTTAG ATACACAAGG TAGTCGTCCA
ATCTCCTTAT CTATGCCACT TCGAAAGCAA GTGTACAAAG GCGATGAAGT GTATAACTTC
TTTGATAACC TATTACCTGA CAATATTGAA GTGAGAAACC GGATTGTTGC TCGTCACAAT
GCTCAATCGA CACAAGCATT CGATCTACTG AGTAAAGTCG GCCAAGACAG TGTTGGTGCA
TTGCAGCTAG TACCGCATGG GCAAGCGCCT TTTGAAGTTA AAAAGATTGA AGCCAAACCT
TTATCTGATG AGGCATTGGA AAAGGTACTA AAAGGTTACC AGTCAGACAT TCCATTGGGC
ATGTTAAATG ATGAAGATGA TTTTCGGATC TCCATTGCGG GCGCGCAGGA AAAGACAGCC
TTACTTAATC TGGATGGCCA GTGGAAACTC CCTATAAAAG CAACACCCAC AACGCATATT
ATTAAATTGC CTATTGGTGA CATACAGAGC CATTCATATC GGATTGATAT GTCTGATAGC
GTTGAAAACG AATTCCTTTG CATGATGATA GTCAGGGAGT TTGGCTTAGC AGTTCCACAC
TGCTCAATAA TCAAAGTGGG CGATATAAAG GCACTTGCAG TGGACAGGTT TGACCGTAAG
TTATCAAGTG ATGGCCAATG GATTATGCGC TTACCGCAAG AGGATTTTTG CCAGACATTA
AATGTCCCGC CCGCTAAAAA ATATGAAAAC CATGGTGGTC CCGGTATTGA ACAGATCATG
CCTTATCTAG TGGGCTCTAC CAATGCAGAT CAGGATAGGC TTGATTTTAT GAAGTCTCAG
GTCTTATTTT GGTTGCTAGC CGCGACAGAT GGTCATGCTA AAAACTTTTC GTTATTTATT
GATGCTGGTG GTGGTTACCG GTTAACGCCC TTTTACGACA TCATATCCAT GTACCCAGTG
ATAGGTGGTA AGGGGCTCAA TATTCGAGAT GCTAAGCTTG CTATGGGGCT TAAGGCCAGT
AAAGGTAAGA AGTATTCGAT AGCACAGATT TTTCCGAGGC ATTTTATTCA AACTGCAAAG
GCTGTCGGTT TTGATACTGA AGTCATGGCT GCCATTTTGA TAGAGATAGA AGATAGAGTC
GATGAGGTCA TTGACAAGGT TAAAGCTCAG CTTCCAGAAG ACTTTCCATC ACATATTAGG
GATTCGATTC TCGATGGCTT AAAGGAGCGG TCGCAGCGAT TGAAGGATTT TGAGTGA
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| Protein sequence | MAVLDIYMNG YLVGELTKST TGSHLFEYAP QWLDTQGSRP ISLSMPLRKQ VYKGDEVYNF
FDNLLPDNIE VRNRIVARHN AQSTQAFDLL SKVGQDSVGA LQLVPHGQAP FEVKKIEAKP
LSDEALEKVL KGYQSDIPLG MLNDEDDFRI SIAGAQEKTA LLNLDGQWKL PIKATPTTHI
IKLPIGDIQS HSYRIDMSDS VENEFLCMMI VREFGLAVPH CSIIKVGDIK ALAVDRFDRK
LSSDGQWIMR LPQEDFCQTL NVPPAKKYEN HGGPGIEQIM PYLVGSTNAD QDRLDFMKSQ
VLFWLLAATD GHAKNFSLFI DAGGGYRLTP FYDIISMYPV IGGKGLNIRD AKLAMGLKAS
KGKKYSIAQI FPRHFIQTAK AVGFDTEVMA AILIEIEDRV DEVIDKVKAQ LPEDFPSHIR
DSILDGLKER SQRLKDFE
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