| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0490 |
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| Symbol | |
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| ID | 6114724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 678085 |
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| End bp | 678804 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631978 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001758883 |
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| Protein GI | 170724857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.714359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTT GCTACATTAA GCCTGAAGAG ATAAGCGCGA TCAGTTTTGA TCTCGATGAT
ACCCTTTATG ATAACTCCCC CATTATTGAG AAAGCTGAGG CTGAATTAGC TCACTTTTTA
CATCATAAAT ATCCACGCAC AAGCCAGTTT GAGAGAGAGG ACTGGTTTGC CCTAAAGCGA
AAATTGCAAA AAGAGCGACC TGAACTTTGT CATGATACAG GCTTAGCAAG GGTGTCTGTG
TTGACGCTTG GTTTGCGTCA GTTAGGCTAT TCTGTGAAAG AGGCCGAAGC TGGTGGACTC
GAAGGGCTTC AATGTTTTTT ACAATATCGC TCAGACTTTA CTCTCTCTCA ACCTGTGCTA
GAACTACTGC ATGGTTTAAA GCAAAAGTAT CGACTTGTTG GGATAACTAA CGGTAATGTC
GATGCTTCCC GTATTGGGTT GGGCTCTCTA TTTGATTTTG TTCTCTCTCC GGGTAACGGT
GTGCGGATGA AGCCAGCACC AGATATGTTT AACGTAGCCT TAGACAGGCT AAATATACCT
GCGGTTCAGT TACTTCATGT GGGTGACAGT CACAGCTCTG ATGTGGTGGG CGCAAGGTTA
GCAGGGTGCC AATCTCTGTG GCTTAATCCC GCTTTTGGGA GGAGCAAAGT TGAGCAAGCT
AAGGCTTATT TACCCCATAT TGAGATAGAT AATATTAAGC AGCTTAAACT GCTTATTTAG
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| Protein sequence | MIRCYIKPEE ISAISFDLDD TLYDNSPIIE KAEAELAHFL HHKYPRTSQF EREDWFALKR
KLQKERPELC HDTGLARVSV LTLGLRQLGY SVKEAEAGGL EGLQCFLQYR SDFTLSQPVL
ELLHGLKQKY RLVGITNGNV DASRIGLGSL FDFVLSPGNG VRMKPAPDMF NVALDRLNIP
AVQLLHVGDS HSSDVVGARL AGCQSLWLNP AFGRSKVEQA KAYLPHIEID NIKQLKLLI
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