| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0489 |
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| Symbol | |
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| ID | 6114723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 677189 |
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| End bp | 678088 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631977 |
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| Product | tyrosine recombinase XerC |
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| Protein accession | YP_001758882 |
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| Protein GI | 170724856 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.110232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTTA ATTGGTTCCA GCACTTCGAA AGCTACCTTA GCGCTGAGCG TCAGTTGTCT
AAGCATACTG TTCGTAACTA TCTTTTTGAG TTAAATCGTG TTGACCAACT GCTTGATGAC
TCAACATCTT GGCTAAGTGT TTCTCGAGAG CAGATCCAAA GTGCCATGAG TCAGCTACAC
CGAAGGGGTC TCAGTCCTCG CTCACTTTCG CTTACCCTTT CGGCTGTTAA ACAGTTTTGT
GAGTTTCTAC TTCGCGAAGG CGTTATACAG ACCAATCCAG CGATAAACCT TAGTGCGCCA
AAGCAAAACA AGCCTCTGCC TAAAAATATG GATCCAGATT CAGTGAGCCA TCTACTTGAG
ATAGATGGTG ATGATCCTTT GAGTCTGAGA GATAAGGCGA TTATGGAGCT GTTTTACTCA
TCAGGTTTGC GTTTAGCGGA GTTGGCGGCT TTGAATATCT CAGATATTCA ATTTTCTGAG
CGTCTGGTGA AGGTGCTAGG TAAAGGGGGA AAGGAGCGAA TTTTACCCAT AGGCAAGATG
GCTATAAGCG CGATAGATAA GTGGTTAGCG TGCCGACGCT TGATACCTTG CGAACACGAT
GCGCTGTTTA TCACCAATAA AGGAACTCGC CTAGCCCATA GAAGTATTCA GGCTCGTTTG
TCTAAATGGG GCCAGGAGCA AGCTTTAAAT ATGCGAGTGC ACCCGCATAA GTTAAGACAC
TCTTTTGCGA CGCATATGCT TGAGTCTAGC GCCGATCTGC GTGCGGTTCA GGAGTTGTTG
GGACATGCGA ACCTCTCGAC GACTCAGATC TATACTAGTC TTGATTTTCA ACATCTGGCA
AAGGTGTATG ACGGTGCTCA TCCAAGAGCG GCAAAAGCTA AGAAGGATAA GAGTGAATGA
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| Protein sequence | MEVNWFQHFE SYLSAERQLS KHTVRNYLFE LNRVDQLLDD STSWLSVSRE QIQSAMSQLH
RRGLSPRSLS LTLSAVKQFC EFLLREGVIQ TNPAINLSAP KQNKPLPKNM DPDSVSHLLE
IDGDDPLSLR DKAIMELFYS SGLRLAELAA LNISDIQFSE RLVKVLGKGG KERILPIGKM
AISAIDKWLA CRRLIPCEHD ALFITNKGTR LAHRSIQARL SKWGQEQALN MRVHPHKLRH
SFATHMLESS ADLRAVQELL GHANLSTTQI YTSLDFQHLA KVYDGAHPRA AKAKKDKSE
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