Gene Swoo_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0488 
Symbol 
ID6114722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp676530 
End bp677168 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID641631976 
Producthypothetical protein 
Protein accessionYP_001758881 
Protein GI170724855 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0367589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG CTTCAAAAGA GAAGACTCCA GCCCCTTTCG ATGAACTCTT AATCCGAGAG 
TTTCTGCTGG ATAATCCTGA TTTTTTTAAT CGCTATCCAG AGCTTTTACT GGCGATGCAG
ATCCCTCACG CAGAGCGTGG TGCCATCTCG TTAATCGAAC GCAAGCAGGA GATGTTCCGC
AATCGAGTTC AGCAACTTGA GGAGGAGATC ACCTCTCTGT TGGGAATGGC TTCACGCAAT
GAGATGATCT ATATGTTTAA TACCGCGTTA TCACTTAAAT TGCTCAAGTG TGAAGATTTA
GGCGAGCTTA GGCAGGTGTT ATCTGAAGGG TTAAAAACAC AGTTTCACTT TAGCCATGTT
CGACTTATCA CTGTGCATGA TATCGATAGC GAGTTATCGC AGATATGGAG TAAGCGCCTG
AATCAGGGTT ATTACTTCGG CAGACTGACA ATGAGTGAGT CAAAGCGGTT ATTTGGCAGT
GAAGTGGGAT CCGTTGCCCT ATCTCGACTT TCTGAAGAGT GTGGTCAGGT GATTTTTGCT
ATTGCCAGTC AAGATGCGAT GCATTTTCAC CCAGAGATGG ACAACTTGTT ACTGGATCAG
CTTAAACAAC TGTTAGATCA TCTACTGCCT AAACTTTAA
 
Protein sequence
MTKASKEKTP APFDELLIRE FLLDNPDFFN RYPELLLAMQ IPHAERGAIS LIERKQEMFR 
NRVQQLEEEI TSLLGMASRN EMIYMFNTAL SLKLLKCEDL GELRQVLSEG LKTQFHFSHV
RLITVHDIDS ELSQIWSKRL NQGYYFGRLT MSESKRLFGS EVGSVALSRL SEECGQVIFA
IASQDAMHFH PEMDNLLLDQ LKQLLDHLLP KL