Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0488 |
Symbol | |
ID | 6114722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 676530 |
End bp | 677168 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631976 |
Product | hypothetical protein |
Protein accession | YP_001758881 |
Protein GI | 170724855 |
COG category | [S] Function unknown |
COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0367589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAG CTTCAAAAGA GAAGACTCCA GCCCCTTTCG ATGAACTCTT AATCCGAGAG TTTCTGCTGG ATAATCCTGA TTTTTTTAAT CGCTATCCAG AGCTTTTACT GGCGATGCAG ATCCCTCACG CAGAGCGTGG TGCCATCTCG TTAATCGAAC GCAAGCAGGA GATGTTCCGC AATCGAGTTC AGCAACTTGA GGAGGAGATC ACCTCTCTGT TGGGAATGGC TTCACGCAAT GAGATGATCT ATATGTTTAA TACCGCGTTA TCACTTAAAT TGCTCAAGTG TGAAGATTTA GGCGAGCTTA GGCAGGTGTT ATCTGAAGGG TTAAAAACAC AGTTTCACTT TAGCCATGTT CGACTTATCA CTGTGCATGA TATCGATAGC GAGTTATCGC AGATATGGAG TAAGCGCCTG AATCAGGGTT ATTACTTCGG CAGACTGACA ATGAGTGAGT CAAAGCGGTT ATTTGGCAGT GAAGTGGGAT CCGTTGCCCT ATCTCGACTT TCTGAAGAGT GTGGTCAGGT GATTTTTGCT ATTGCCAGTC AAGATGCGAT GCATTTTCAC CCAGAGATGG ACAACTTGTT ACTGGATCAG CTTAAACAAC TGTTAGATCA TCTACTGCCT AAACTTTAA
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Protein sequence | MTKASKEKTP APFDELLIRE FLLDNPDFFN RYPELLLAMQ IPHAERGAIS LIERKQEMFR NRVQQLEEEI TSLLGMASRN EMIYMFNTAL SLKLLKCEDL GELRQVLSEG LKTQFHFSHV RLITVHDIDS ELSQIWSKRL NQGYYFGRLT MSESKRLFGS EVGSVALSRL SEECGQVIFA IASQDAMHFH PEMDNLLLDQ LKQLLDHLLP KL
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