| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0468 |
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| Symbol | |
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| ID | 6114698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 582259 |
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| End bp | 584271 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631952 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001758861 |
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| Protein GI | 170724835 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAA ACCCCGGACA AAATGATGCC GTTCACTATG TATCTGGCCC CTGCTTAGTA
CTGGCTGGCG CTGGTAGTGG TAAGACCCGT GTGATCATCA ACAAAATTGC CTATCTGGTT
GAGAAGTGCG GGTATAAGGC CAGAACGATT GCGGCGGTGA CTTTTACCAA TAAAGCGGCA
CGTGAGATGA AGGAGCGTGT TGCTCAATCT ATGGGGCGAA AGCAGGCGCG AGGCTTGTGG
ATCTCAACCT TTCACACCTT AGGTTTGGAG GTGATTAAGC GTGAACATAA AGTCATCGGC
TTAAAGCCTG GCTTCTCACT GTTTGACGAT CAGGACTCTT TGGCACTACT CAAAGAGCTG
ACTGAAGATG AGTTTGACGG TGATAAAGAT CTGCTGAAAA ACTTGATGAC AGCCATCTCT
AACTGGAAGG GAGATCTGGT TGTTCCTGAG CAGGCGATCA AGCTTGCAAA GGATGAGCAG
TCTAAGTTAC ATGCGGTTTT ATATCAGCGC TATGCCAAAC ATATGAAGGC ATACAATGCG
CTGGATTTTG ATGATCTTAT TTTAATCCCC ACTCTTTTGC TGAGGCATAA CAAAGAGGTG
AGGGAGCGCT GGCAGCAACG TATTCAATAT ATGCTGGTGG ATGAGTATCA AGACACTAAC
ACCAGTCAGT ATGAGCTGGT TAAGTTAATT GTGGGTGAGC GAGCACGCTT TACCGTGGTA
GGGGATGACG ATCAGTCTAT CTATTCTTGG CGTGGTGCTA AGCCCCAAAA CCTTGTGTTA
CTGGGCAAAG ACTTCCCTAA ACTTAAGTTG ATTAAGCTGG AGCAAAACTA CCGCTCTAGC
CAACGAATTT TACGCGCGGC GAATATTCTG ATCGCTAACA ATCCTCACGT TTATGATAAG
GCGCTGTTTA GTGAGCTTGC TTATGGTGAA CCTTTAAGGG TGTTGATTGC AGCCAACGAG
GAGCAGGAAG CTGAGCGGGT GATTGCTGAG ATGATCCGGC ATAAGTTTAT GGGGAAAACT
CAGTTCGGCG ATTACGCGAT TCTCTATCGA GGTAATCATC AATCTCGTCT GCTTGAGCGC
TCACTGATGA CGAACCGTAT TCCCTATAAG TTAAGCGGTG GTACCTCATT TTTCGGTCGC
GCAGAGATTA AAGATATCAT GGCCTACTTA AGGCTGGTGG TGAATCCCGA CGATGATAAT
GCCTTTTTGC GTGTGGTGAA TTTGCCAAAG CGTGGTATTG GTCCCTCAAC ACTTGAGCGC
TTAGGTAACT ATGCTAATGA GCGTCATATC TCTATGTTTG AGGCAATTTT TCAAGCTGAG
CTGAATCATC ACCTGACACC TGCGGCGATG GGTTCACTGT ATAAGTTTGG TCAGTTCGTT
GTTGATACCG GAGAGAAAGC AACTCGTGGC GATCCGGTTG ATGCGGTCAA GCACCTGATT
CGTAATATTA ATTACGAAGA TTATCTGTAT GAAACCAGTA CTAGCGCCAA AGCGGCTGAG
ATGAGAATGA AAAATATCTC AGAGTTGTAC CGCTGGGTGA CTGAGATGCT TGAGGGCGAT
GAGCTAGATG AGGGGATGAC TCTGCCAGAG GTGGTCACTC GCTTAACACT CAGAGATATG
ATGGAGCGTA ACAGTGAAGA TGAGGGGGGT GATCAGGTGC AGTTGATGAC CTTACACGCC
TCAAAAGGTC TGGAGTTTCC CTATGTGTTT ATGGTGGGAA CAGAGGAGCG GATCTTGCCA
CATCAAACCA GTATCGATGA GGATAATGTT GAGGAAGAGC GCCGCTTAGC CTATGTGGGG
ATCACTCGTG CCCAGAAGGA GCTTTGGTTT GTATTGTGCC GTGAGCGACG TCAGTTTGGT
GAGACGATGC GCTGTGAGCC GAGCCGCTTT TTGATGGAGT TGCCTCAAGA TGATCTAATT
TGGGAGAATC GTAAGCAGGT TCAGAGCGAA GAGCAACGTC AGCAATCCGG TAGGTCAAAT
ATTGCGAATC TAAGGGATAT GTTTAAGAAG TAA
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| Protein sequence | MKLNPGQNDA VHYVSGPCLV LAGAGSGKTR VIINKIAYLV EKCGYKARTI AAVTFTNKAA
REMKERVAQS MGRKQARGLW ISTFHTLGLE VIKREHKVIG LKPGFSLFDD QDSLALLKEL
TEDEFDGDKD LLKNLMTAIS NWKGDLVVPE QAIKLAKDEQ SKLHAVLYQR YAKHMKAYNA
LDFDDLILIP TLLLRHNKEV RERWQQRIQY MLVDEYQDTN TSQYELVKLI VGERARFTVV
GDDDQSIYSW RGAKPQNLVL LGKDFPKLKL IKLEQNYRSS QRILRAANIL IANNPHVYDK
ALFSELAYGE PLRVLIAANE EQEAERVIAE MIRHKFMGKT QFGDYAILYR GNHQSRLLER
SLMTNRIPYK LSGGTSFFGR AEIKDIMAYL RLVVNPDDDN AFLRVVNLPK RGIGPSTLER
LGNYANERHI SMFEAIFQAE LNHHLTPAAM GSLYKFGQFV VDTGEKATRG DPVDAVKHLI
RNINYEDYLY ETSTSAKAAE MRMKNISELY RWVTEMLEGD ELDEGMTLPE VVTRLTLRDM
MERNSEDEGG DQVQLMTLHA SKGLEFPYVF MVGTEERILP HQTSIDEDNV EEERRLAYVG
ITRAQKELWF VLCRERRQFG ETMRCEPSRF LMELPQDDLI WENRKQVQSE EQRQQSGRSN
IANLRDMFKK
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