| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0461 |
|---|
| Symbol | |
|---|
| ID | 6114691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 573366 |
|---|
| End bp | 573851 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641631945 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001758854 |
|---|
| Protein GI | 170724828 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGT TGCAACTCGA TAAGATAGAT CTGGCCATCT TAAAACTGCT ACAAGGCCAA
GGTAAACTCT CTAACCAAGA GCTGGCAGAA AAAGTAGGGC TATCGGCTTC TCCCTGCTCT
CGACGCGTCA AGGCGATGGA GGAGAGCGGC TATATCGCCG GGTACGCCAC CTTGCTTTCA
GCCGAGCACT TTAATCTCTC TCTCACCGCC TATGTGCAAG TGAGATTAGA GAAGCACTCT
CAAGCAATTT TAGACTCCTT TGAAGATAAG ATAACCCAGT ACGATGAGGT GCAAGAGTGC
TGCCTATTAA CAGGTAGCGA TGCAGATTAT CAGCTCAAAG TACTCATCGC CGATATGAAA
GAGTTTAAGA CTTTTCTATT GGAGAAGCTG ACAACCGACC CGCATATCTC AGGAGTAAAA
TCCAGTTTTG TGCTTAAGCA GGTTAAGAGT AAAACCAGCA TCCCACTACC AACTCAGCTC
CCTTAA
|
|---|
| Protein sequence | MAELQLDKID LAILKLLQGQ GKLSNQELAE KVGLSASPCS RRVKAMEESG YIAGYATLLS
AEHFNLSLTA YVQVRLEKHS QAILDSFEDK ITQYDEVQEC CLLTGSDADY QLKVLIADMK
EFKTFLLEKL TTDPHISGVK SSFVLKQVKS KTSIPLPTQL P
|
|---|
| |