Gene Swoo_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0457 
Symbol 
ID6114687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp569224 
End bp569886 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content48% 
IMG OID641631941 
Producthypothetical protein 
Protein accessionYP_001758850 
Protein GI170724824 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAA AAATAATGGG CTCACAAGCC TTTTCCTACA TAGATATCGA TCTGGAACCA 
GGTGAAACAG TGATTGCTGA ATCTGATGCC ATGAGCAGTA TGGATGCTGA TTTGGATTTG
ACAGCAACCT TCAACGGCGG CTTTTTTAAG GGGCTACTGA AGAAGTTTTT TGGCGGTGAA
ACTCTGTTTA TTAGCCGCTA TAGCAATAAT ACCTCGGCGC CTAAGCGAGT GACTTTAGTG
CAGCCGGTTC CCGGTGAACT CCGCTGTCAT GAGCTTAATG GTGATGAGTT TAATCTTCAG
CCTGGCGCTT ACTTGGCGTC AACGGAAGGG GTTAAGTTGG GTCTGAGGTG GGCGGGCTTT
GTCTCCTTTA TTGCCCGTGA AGGCCTGTTT AAGCTGACGG TAACAGGTGA AGGTAAGGTC
TGGTATGGCG CATATGGTGC CTTGCTGGAG AAGGAGATCG ACGGGGAATA CATTGTCGAT
ACCTCTCATT TGGTGGCCTA CGAGCCCGGA ATTAAGCTAA AACTGCAGTT AGCGGGTGGG
ATCTTCTCTA GCTTCTTTGG TGGTGAGGGC TTAGTGACAC GTGTGGAGGG CAAAGGGAAG
ATTATTGTCC AGAGCCGCAG TGTTTCAGGT CTTGCTGGTT GGTTAAATCC AAAGTTCAGA
TAA
 
Protein sequence
MEAKIMGSQA FSYIDIDLEP GETVIAESDA MSSMDADLDL TATFNGGFFK GLLKKFFGGE 
TLFISRYSNN TSAPKRVTLV QPVPGELRCH ELNGDEFNLQ PGAYLASTEG VKLGLRWAGF
VSFIAREGLF KLTVTGEGKV WYGAYGALLE KEIDGEYIVD TSHLVAYEPG IKLKLQLAGG
IFSSFFGGEG LVTRVEGKGK IIVQSRSVSG LAGWLNPKFR