Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0457 |
Symbol | |
ID | 6114687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 569224 |
End bp | 569886 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631941 |
Product | hypothetical protein |
Protein accession | YP_001758850 |
Protein GI | 170724824 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAA AAATAATGGG CTCACAAGCC TTTTCCTACA TAGATATCGA TCTGGAACCA GGTGAAACAG TGATTGCTGA ATCTGATGCC ATGAGCAGTA TGGATGCTGA TTTGGATTTG ACAGCAACCT TCAACGGCGG CTTTTTTAAG GGGCTACTGA AGAAGTTTTT TGGCGGTGAA ACTCTGTTTA TTAGCCGCTA TAGCAATAAT ACCTCGGCGC CTAAGCGAGT GACTTTAGTG CAGCCGGTTC CCGGTGAACT CCGCTGTCAT GAGCTTAATG GTGATGAGTT TAATCTTCAG CCTGGCGCTT ACTTGGCGTC AACGGAAGGG GTTAAGTTGG GTCTGAGGTG GGCGGGCTTT GTCTCCTTTA TTGCCCGTGA AGGCCTGTTT AAGCTGACGG TAACAGGTGA AGGTAAGGTC TGGTATGGCG CATATGGTGC CTTGCTGGAG AAGGAGATCG ACGGGGAATA CATTGTCGAT ACCTCTCATT TGGTGGCCTA CGAGCCCGGA ATTAAGCTAA AACTGCAGTT AGCGGGTGGG ATCTTCTCTA GCTTCTTTGG TGGTGAGGGC TTAGTGACAC GTGTGGAGGG CAAAGGGAAG ATTATTGTCC AGAGCCGCAG TGTTTCAGGT CTTGCTGGTT GGTTAAATCC AAAGTTCAGA TAA
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Protein sequence | MEAKIMGSQA FSYIDIDLEP GETVIAESDA MSSMDADLDL TATFNGGFFK GLLKKFFGGE TLFISRYSNN TSAPKRVTLV QPVPGELRCH ELNGDEFNLQ PGAYLASTEG VKLGLRWAGF VSFIAREGLF KLTVTGEGKV WYGAYGALLE KEIDGEYIVD TSHLVAYEPG IKLKLQLAGG IFSSFFGGEG LVTRVEGKGK IIVQSRSVSG LAGWLNPKFR
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