| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0446 |
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| Symbol | |
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| ID | 6114676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 548798 |
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| End bp | 550348 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641631930 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001758839 |
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| Protein GI | 170724813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.826759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGCAT TAGCCTCAAA ATCTAAACTG GATTTAGCCC ACTATTATCT GCAGAAGACC
TTGCTCTCTT CAGTGTATGA CGTTGCCAAA GTGACGCCGC TGTCGAGCCT GAATAAGCTC
TCGGCGCGTC TAGGCTGTCA GGTATTTCTT AAGCGTGAAG ATATGCAACC TGTGCACTCA
TTTAAGCTGC GCGGCGCTTA TAACAAGATG TCAGAGCTGA CAGCACAGGA GTGCGAGTGC
GGTGTGGTCT GCGCCTCGGC AGGGAACCAT GCTCAAGGGG TCGCCATGTC GGCGGCCGCT
CGTGGCATTA GCGCTGTGAT TGTGATGCCG GAAACGACTC CAGATATCAA GGTTGATGCG
GTGCGCCGTC TTGGCGGTGA AGTGGTGCTG CATGGGCAAG CGTTTGATCA AGCTAATGCC
TATGCACAGA ACTTGGCTAA AACAGAGGGG CGCGTATATG TGGCGCCCTT TGATGATGAG
GCGGTCATCG CAGGACAAGG CACGGTTGCG CAAGAGATGC TGCAACAGCA GCGCGACCTT
GAAGTGGTGT TTGTACCTGT TGGTGGCGGT GGCTTGATTG CGGGTATTGC CGCTTATTAT
AAAGCGGTGA TGCCTCAGGT GAAGATTATC GGTGTTGAGC CGGAAGATTC AGCCTGCTTA
AAAGCCGCCC TTGAGGCTGA TGAGCGAGTG GTACTGGCGC AAGTGGGTCT GTTTGCTGAC
GGTGTGGCAG TAAAGCAGAT AGGTGCTGAG CCCTTTAGGT TAGCCCGTGA GTATGTCGAC
AGTGTCGTGA CGGTCACCTC TGATGAGATC TGTGCATCGG TGAAAGATAT TTTTGAGGAT
ACTCGCGCTA TTGCTGAACC TGCGGGTGCT CTTGCGTTAG CAGGTCTGAA AAAATATATG
GGCAGTGAAG GTAGAGGTGA GAAGGTGGCG GCGATTTTAA GTGGCGCCAA CGTTAACTTC
CATAGCCTAC GTTATGTGTC TGAGCGCTGC GAATTGGGCG AGAAGAAGGA GGCGATTCTA
GCGGTTAAAG TTCCTGAGCG TCCTGGTATC TTTCTGCGTT TTTGCGAGTT ACTCGAAAAG
CGGGTTATGA CAGAGTTTAA CTACCGTTTT AGTAGCCGAG ACAAAGCGGT GGTATTTGCT
GGGATCCGCC TTTCTCAAGG CCAAGAGGAG CTCGATGAGA TCGTCGCTCG ACTTGAGAGT
GATGGCTTTG AGGTACAAGA CCTCTCCCAT GATGAAACAG CCAAACTGCA TGTGCGCTAC
ATGGTGGGCG GACACCCACC AGAAGCGTTA GAGGAGCGTC TGTTTAGCTT CGAGTTTCCT
GAGCACCCCG GCGCCCTGTT TAAGTTTTTG ACTACCCTGC AAAGCAAGTG GAATATTAGT
CTGTTCCACT ATCGAAATCA TGGCGCAGCC TATGGCCGAG TGCTCGCGGG CTTTGAAGTA
CCAGAGTCTG ACAGTTTAGC GTTCCAACAG TTTCTAACTG AGCTCGGGTT TGTTTATCAG
GAGGAGACCC AGAGTCCCGC CTATAAACTC TTCCTCGATA ACAGGGATTA G
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| Protein sequence | MLALASKSKL DLAHYYLQKT LLSSVYDVAK VTPLSSLNKL SARLGCQVFL KREDMQPVHS
FKLRGAYNKM SELTAQECEC GVVCASAGNH AQGVAMSAAA RGISAVIVMP ETTPDIKVDA
VRRLGGEVVL HGQAFDQANA YAQNLAKTEG RVYVAPFDDE AVIAGQGTVA QEMLQQQRDL
EVVFVPVGGG GLIAGIAAYY KAVMPQVKII GVEPEDSACL KAALEADERV VLAQVGLFAD
GVAVKQIGAE PFRLAREYVD SVVTVTSDEI CASVKDIFED TRAIAEPAGA LALAGLKKYM
GSEGRGEKVA AILSGANVNF HSLRYVSERC ELGEKKEAIL AVKVPERPGI FLRFCELLEK
RVMTEFNYRF SSRDKAVVFA GIRLSQGQEE LDEIVARLES DGFEVQDLSH DETAKLHVRY
MVGGHPPEAL EERLFSFEFP EHPGALFKFL TTLQSKWNIS LFHYRNHGAA YGRVLAGFEV
PESDSLAFQQ FLTELGFVYQ EETQSPAYKL FLDNRD
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