Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0445 |
Symbol | |
ID | 6114675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 546946 |
End bp | 548796 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641631929 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001758838 |
Protein GI | 170724812 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAAC TACGTTCAGC TACCAGTACC CAAGGTCGTA ACATGGCTGG AGCCCGCGCT TTATGGCGTG CAACTGGAGT TAAAGACAGT GATTTCGGTA AGCCGATTAT TGCGATTTCA AACTCTTTCA CTCAATTTGT GCCGGGCCAT GTTCACCTAA AAGATATGGG CTCATTGGTG GCTGGCGCCA TCGAAGAAGC GGGCGGTATC GCAAAAGAGT TCAACACCAT AGCTGTCGAT GATGGTATCG CCATGGGCCA CGGCGGCATG CTCTATAGCT TGCCCTCTCG TGAGCTGATT GCTGACAGTG TTGAGTATAT GGTCAATGCC CACTGCGCCG ATGCATTAGT TTGTATCTCT AACTGCGACA AGATAACCCC CGGCATGATG ATGGCCGCGC TGCGCCTCAA CATTCCAGTA ATTTTTGTCT CTGGTGGTCC GATGGAAGCG GGTAAAACGA AGCTATCAGG GGATATCATC AAGCTAGATT TAGTTGATGC CATGGTGGCA GGGGCTGATG AACGCGTATC CGATGAGGAT AGCGAGAAGA TCGAGCGCAG TGCTTGTCCT ACCTGTGGTT CATGTTCTGG CATGTTTACC GCTAACTCAA TGAACTGTTT AACTGAAGCC TTAGGTCTGT CACTGCCGGG CAATGGCTCA ATGCTTGCGA CCCACGCCGA TCGCCGTGAA CTATTTTTAG AAGCGGGCCG CCGCATTATG GATCTGGCAA CCCGTTACTA TAAGCATGAT GATGAGTCGG CACTGCCTCG CAATATCGCT AACTTTAATG CCTTTGAAAA TGCCATGACC TTAGATATCG CCATGGGTGG ATCGAGCAAT ACCGTATTGC ACCTACTTGC TGGTGCTCAA GAAGCTAAAG TCGATTTCAC CATGGATGAT ATAGACAGAC TCTCTCGCAA GGTGCCTCAC CTATGTAAAG TGGCTCCATC GACGCCTAAG TACCATATGG AAGACGTCCA TCGCGCCGGA GGTGTGATGG GGATTTTAGG TGAGTTAGAC AGAGCAGGGT TAATTCACAA TGACGCGTAC CACGTTGCAG GCAAGAACCT TAAAGAAGTG TTAGCTAAGT GGGATATCGC CCAGAGTCAA GATGAAGCCG TGCGTAAATT CTTCTCCGCA GGCCCTGCCG GTATTCCTAC CACTAAAGCC TTTAGTCAAG ATTGCCGCTG GGACAGTGTC GATGATGACC GTGAAGGCGG CTGTATTCGT AAGCGTGAGT TCGCCTTTAG CCAAGAGGGT GGCCTTGCGG TGCTTTCCGG TAATATCGCC CTCGATGGCT GTATCGTTAA GACCGCTGGT GTCGAGGAGG AGAACCACAC CTTTATCGGT TCGGCGCGTG TGTATGAGAG TCAAGATGAT GCGGTTGCTG GGATCCTCGG TGGTGAAGTT GTCGCTGGTG ATGTAGTGGT TATCCGCTAC GAAGGGCCAA AAGGCGGTCC AGGAATGCAG GAGATGTTAT ATCCCACCAG CTACCTTAAG TCTCGCGGTT TAGGTAAAGC TTGTGCCCTT ATCACTGATG GTCGTTTCTC TGGTGGTACC TCAGGACTCT CTATCGGCCA TGTGTCGCCA GAAGCGGCAG CGGGTGGCAC CATAGGTCTT GTTGAGACAG GCGATAGAAT TGAGATAGAT ATTCCAGCAC GTTCAATCAA GTTAGCCATT AGTGATGTTG AGCTGGCTGC GCGCCGCAGT GCCATGGAGT CTCGTGGTAA GCAAGCGTGG AAGCCAGTTG ATCGCATCAG AGAGGTCTCA TTGGCCCTTA AAGCGTATGC GCTACTGGCA ACCAGCGCCG ACAAAGGCGC GGTTCGAGAT GTCAGTAAGC TGGAGGATTG A
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Protein sequence | MPKLRSATST QGRNMAGARA LWRATGVKDS DFGKPIIAIS NSFTQFVPGH VHLKDMGSLV AGAIEEAGGI AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADALVCIS NCDKITPGMM MAALRLNIPV IFVSGGPMEA GKTKLSGDII KLDLVDAMVA GADERVSDED SEKIERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS MLATHADRRE LFLEAGRRIM DLATRYYKHD DESALPRNIA NFNAFENAMT LDIAMGGSSN TVLHLLAGAQ EAKVDFTMDD IDRLSRKVPH LCKVAPSTPK YHMEDVHRAG GVMGILGELD RAGLIHNDAY HVAGKNLKEV LAKWDIAQSQ DEAVRKFFSA GPAGIPTTKA FSQDCRWDSV DDDREGGCIR KREFAFSQEG GLAVLSGNIA LDGCIVKTAG VEEENHTFIG SARVYESQDD AVAGILGGEV VAGDVVVIRY EGPKGGPGMQ EMLYPTSYLK SRGLGKACAL ITDGRFSGGT SGLSIGHVSP EAAAGGTIGL VETGDRIEID IPARSIKLAI SDVELAARRS AMESRGKQAW KPVDRIREVS LALKAYALLA TSADKGAVRD VSKLED
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