| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0444 |
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| Symbol | |
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| ID | 6114674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 545475 |
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| End bp | 546398 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641631928 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001758837 |
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| Protein GI | 170724811 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase
[TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.976398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA AGAGAGCTGA GTATATATGG TTTAATGGTG AGATCATGCC TTGGGGAGAT
GCCAAGGTGC ATGTGATGTC CCACGGTTTG CACTATGGTT CCTCTGTTTT CGAAGGGATC
CGTGTCTACG ATACTCATCT TGGCCCAGCG GGTTTTCGTC TAACGCCTCA CGTTGAGCGC
TTATATGACT CAGCCAAAAT CTATCGCATG CCTATTCCTT ACAGTTTCGA TGAACTGATG
CAGTCATGCA CAGACATCGT AAAGAAGAAC GATTTAAAAA GTGCTTATAT CCGCCCGCTG
GCGTTTTATG GTGATGTGGG AATGGGGATC ACGCCGCCAA AAGATGCTGT GTGCGATGTG
ATGGTGGCTG CTTTCCCATG GGGAGCCTAC TTAGGGGAGG ACAGCATGGA AGCGGGCGTC
GATGTTGCCG TTACTTCGTG GAACCGTTTA GCGCCCAATA CCATTCCAAC TGGCGCTAAA
GCGGGTGGTA ACTACCTCTC CTCAATTCAG ATCTCCACCG AAGCTAAGCG TAATGGTTTC
GATGAGGGGA TCGCACTCGA TGTTAATGGT CTCGTCAGTG AAGGCGCTGG TGCGAACTTA
TTTGTTGTAA AGAAAGGGAA AATTTACACA CCACCTGCCA CAGCTGCTAT TTTAATGGGC
CTGACTCGAG ACTCAATTAT GGTGCTTGCC CGTGACTTAG GTTATGAAGT GGTGGAAGAG
GCGATGTCCC GTGAGTTTCT CTATCTTGCT GATGAGATAT TTATGACAGG CACCGCCGCT
GAAATCGTCC CTGTGCGCAG TGTCGATCGC ATCGAAGTCG GTGAAGGTAA GCGAGGCGCC
ATTACCAAGC AGATCCAGCA GAGCTTCTTC GGCCTATTTG ATGGCTCTAC CGAAGATAAA
TGGGGCTGGT TGGAAGTACT ATAA
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| Protein sequence | MTAKRAEYIW FNGEIMPWGD AKVHVMSHGL HYGSSVFEGI RVYDTHLGPA GFRLTPHVER
LYDSAKIYRM PIPYSFDELM QSCTDIVKKN DLKSAYIRPL AFYGDVGMGI TPPKDAVCDV
MVAAFPWGAY LGEDSMEAGV DVAVTSWNRL APNTIPTGAK AGGNYLSSIQ ISTEAKRNGF
DEGIALDVNG LVSEGAGANL FVVKKGKIYT PPATAAILMG LTRDSIMVLA RDLGYEVVEE
AMSREFLYLA DEIFMTGTAA EIVPVRSVDR IEVGEGKRGA ITKQIQQSFF GLFDGSTEDK
WGWLEVL
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