| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0432 |
|---|
| Symbol | |
|---|
| ID | 6114662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 533285 |
|---|
| End bp | 535270 |
|---|
| Gene Length | 1986 bp |
|---|
| Protein Length | 661 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641631916 |
|---|
| Product | cytochrome o ubiquinol oxidase, subunit I |
|---|
| Protein accession | YP_001758825 |
|---|
| Protein GI | 170724799 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.911971 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTC TTGGAAAACT AACTTTAGAA TCAATCCCAT ACCATGAACC TATTATCATG
GTCACTTTAG CTGTCGTGGC GCTAATAGGC GTTATCATCG CGGCATTGAT TACTAAACAT
AAAAAGTGGG CTGTGTTATG GAATGACTGG TTTACCTCGG TCGATCATAA ACGCTTAGGC
ATCATGTATA TCATCTTAGC ACTGGTGATG CTCATTCGTG GCTTCTCCGA TGCCATTATG
ATGCGTACAC AGCAAGCACT CGCAACCAAT GGCGCTGCTG GCTATCTGCC CCCTGAGCAC
TATGACCAAA TCTTCACTGC CCACGGGGTG ATCATGATTA TCTTTATGGC GATGCCATTT
ATGATAGGCC TGATGAACCT AATTGTTCCA CTGCAGATAG GTGCCAGAGA TGTCGCCTTT
CCGTTTCTGA ACAACTTAAG CTTTTGGCTT ACCGCTTCAG GGGCTGTACT GATCAATATC
TCACTTGGGT TAGGCGAATT TGCAAAAACA GGTTGGGTAG CCTATCCGCC GCTTTCGGAG
CTGTCATTTA GCCCTGGAGT TGGGGTCGAT TACTATATTT GGGCGTTGCA GATCTCCGGT
ATAGGGACAA CCTTAACTGG GGTTAACTTT ATCGCAACTG TGCTGAAGAT GCGTGCACCT
GGTATGAAGT TAATGCAGAT GCCTATTTTT ACTTGGACCT GCACTTGGGC CAATATTTTA
ATTGTGGCCT CTTTCCCAAT CTTAACAGCA GTCTTGGCCA TGTTAACCCT AGATCGCTAT
CTGGGATTCC ACTTCTTCAC TAATGCAGGT GGCGGTAACG CCATGATGTA CATCAACCTG
TTTTGGGCAT GGGGCCATCC AGAAGTTTAT ATTCTAATTT TGCCCGCCTT CGGTATTTTT
TCAGAGATCA TATCAACATT TACCTCTAAG CGCCTATTTG GTTATAAATC TATGGTTTGG
GCCAGTGGTG CCATCTCAAT TTTAGGCTTT ATCGTTTGGT TACATCACTT CTTCACTATG
GGTTCTAGCG CAAACGTGAA TGCTTTCTTT GGTGTGATGA CCATGGTGAT TGCTGTGCCG
ACGGGGGTCA AATTATTCAA CTGGCTGTTT ACCATCTATC GTGGCCGCCT TCGCTTAACC
GTGCCAGTGT TATGGACTTT AGGTTTTATG ACGACCTTCA CCATAGGGGG GATGACAGGG
GTCTTACTCG CGGTACCGGG AGCTGATTAT GTATTGCATA ACAGTTTATT CCTCATCGCG
CATTTTCATA ACACCATCAT AGGCGGTGCA GTTTTTGGTT ACTTAGCTGG TTTCGCTTAC
TGGTTCCCTA AAGCGATGGG TTTCAAGCTC AATGAACGCC TAGGGAAAGC GGCATTTTGG
TGTTGGCAGG TGGGCTTCTA CGTTGCCTTT ATGCCTCTAT ATGTGCTTGG CTTCTTAGGC
ATGACCCGTC GTATCGGTCA CACTGACAAT CCTGATTGGA ACTTCTGGAT CTATTTAGCG
GCTATCGGTG CCTTTATTAT CTTGGCTGGG ATCATATTGC AGTTTGTGCA GCTCTATGTG
AGTTTTCGTG ATCGTGAGCA GAACTTAGAT ACCACGGGCG ATCCTTGGAA TGGTCACACA
TTAGAGTGGT CAACATCATC ACCACCTCAG TTTTATAACT TTGCCAAAGA TCCTCACGTG
TCTGATATAG ATTGTTTTAC AGACATGAAA GAGAAAGGTG AGGCTTACCA GCGTCATGAT
GCTTATGAGC CAATTCACAT GCCCAAAAAT ACCGCCAGCG GAATACTGAT GGCACTGGGC
ATTACTGCAG CTGGTTTTGC CGCTATTTGG CACATTCTTT GGCTGGCAAT TGCTGGGATA
CTAGGCGCCT TCGTGGTGTT TCTCTGTCGT GCTTATAGCA ATGACCATGA TTATTATGTT
CAACCTGATG AAGTGGCCCG TATTGAAAAT GCTCACTTAG ATAAGGTTGC AAGGGGACTA
ATATGA
|
|---|
| Protein sequence | MSFLGKLTLE SIPYHEPIIM VTLAVVALIG VIIAALITKH KKWAVLWNDW FTSVDHKRLG
IMYIILALVM LIRGFSDAIM MRTQQALATN GAAGYLPPEH YDQIFTAHGV IMIIFMAMPF
MIGLMNLIVP LQIGARDVAF PFLNNLSFWL TASGAVLINI SLGLGEFAKT GWVAYPPLSE
LSFSPGVGVD YYIWALQISG IGTTLTGVNF IATVLKMRAP GMKLMQMPIF TWTCTWANIL
IVASFPILTA VLAMLTLDRY LGFHFFTNAG GGNAMMYINL FWAWGHPEVY ILILPAFGIF
SEIISTFTSK RLFGYKSMVW ASGAISILGF IVWLHHFFTM GSSANVNAFF GVMTMVIAVP
TGVKLFNWLF TIYRGRLRLT VPVLWTLGFM TTFTIGGMTG VLLAVPGADY VLHNSLFLIA
HFHNTIIGGA VFGYLAGFAY WFPKAMGFKL NERLGKAAFW CWQVGFYVAF MPLYVLGFLG
MTRRIGHTDN PDWNFWIYLA AIGAFIILAG IILQFVQLYV SFRDREQNLD TTGDPWNGHT
LEWSTSSPPQ FYNFAKDPHV SDIDCFTDMK EKGEAYQRHD AYEPIHMPKN TASGILMALG
ITAAGFAAIW HILWLAIAGI LGAFVVFLCR AYSNDHDYYV QPDEVARIEN AHLDKVARGL
I
|
|---|
| |