Gene Swoo_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0418 
Symbol 
ID6114648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp515370 
End bp516665 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content41% 
IMG OID641631902 
Productradical SAM domain-containing protein 
Protein accessionYP_001758811 
Protein GI170724785 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAAT ATTCAATGAA ACAGAGTACC TATATGGACG CAGCTCCCCT GCTAAGTGCA 
GAGAAAGATC TCAACCCTCA TCCCGCTTAC GTTCGGCGTT TCCATGCGAT GGCCAAACCA
ACGGGGTCAA GGTGCAACAT AGATTGTCAG TACTGCTTCT ATCTACACAA AAAGGACTTA
TTAGGCCAGC CTCAACAGAG TCACATGTCT GATGAAACAC TTTCCCTTTT TATTCAAAAT
TATATAGATA GCCAAGATGG CGATGAGATC ATATTTTCCT GGCAAGGTGG CGAGCCAACA
CTAATGGGGT TGGATTTCTT CAAGAAAGTG ATCCAACTTC AACAAAGATA CTGCCCACTT
GGAGTAACCA TAAAAAATGA CTTACAAACC AATGGAGTAT TACTCAACAA AGAGTGGGCT
ATTTTTCTAA AACAGCATGA CTTTTTAGTC GGATTATCCA TTGATGGCCC ACAAGAGCTA
CACGATATGT ATCGTGTTAC TCGTAGTGGA AAACCCACCT TTGTATTAGT AATGGCTGCA
GCGAGAATAC TCAAAAAATA CGGTGTTCAA TTTAATGCCC TAGCGGTTAT CAACCGTAAA
AATGTGCTTT ATCCGAAAGA GGTTTACCGA TTTCTAACTC AAGAATTAGG CGCAACTTAT
ATTCAATTTA CCCCTTGTGT AGAAGGTAAT AACTTCACTC AAACCGCACC ACAATTTTGG
AATGAACAGA TGATTCCAAT TATAGGAAGT GAGCTTTCAA AACCAGGTCA TCCAATGTCA
GTAGTTACAA GTTGGTCGGT AGATCCTGAT GATTGGGGAA GATTTTTAAT TTCGGTTTTC
GATGAATGGG TCAATAACGA TTTGGGTCGA GTATTGGTGA ACTTGTTTGA AACTGCCGTC
GCACAAACAA TGGGGTTACC CGCTCAAATC TGCGTAATGG CAGAATTTTG TGGCAAAGGC
ATAGCTGTAG AGCATGATGG CAAAGTATAT TCATGTGATC ATTATGTCTA TCCCGAATAT
GAGCTAGGGA ATATCCATCA AAGCAGTTTA AATAACTTGG TATTTTCAAC TCGCCAAGAA
ACCTTTGGTA TGGCTAAGCG TGACAGCTTG CCAAATTATT GCAAATCGTG CCCCCATCTA
AATTTATGCT GGGGAGAGTG CCCTAAAAAC AGGTTAATTC GTACCCCTGA TGGTGAGCTA
GGTTTAAACT ACCTATGCTC AGGGCTTAGT CAGTTCTTCG AACATGCAAA GCCCATTCTT
AATGGTATTG CTGCCATATT AGAGAGAAAA GAGTAG
 
Protein sequence
MVQYSMKQST YMDAAPLLSA EKDLNPHPAY VRRFHAMAKP TGSRCNIDCQ YCFYLHKKDL 
LGQPQQSHMS DETLSLFIQN YIDSQDGDEI IFSWQGGEPT LMGLDFFKKV IQLQQRYCPL
GVTIKNDLQT NGVLLNKEWA IFLKQHDFLV GLSIDGPQEL HDMYRVTRSG KPTFVLVMAA
ARILKKYGVQ FNALAVINRK NVLYPKEVYR FLTQELGATY IQFTPCVEGN NFTQTAPQFW
NEQMIPIIGS ELSKPGHPMS VVTSWSVDPD DWGRFLISVF DEWVNNDLGR VLVNLFETAV
AQTMGLPAQI CVMAEFCGKG IAVEHDGKVY SCDHYVYPEY ELGNIHQSSL NNLVFSTRQE
TFGMAKRDSL PNYCKSCPHL NLCWGECPKN RLIRTPDGEL GLNYLCSGLS QFFEHAKPIL
NGIAAILERK E