Gene Swoo_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0410 
Symbol 
ID6114640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp505100 
End bp506623 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content50% 
IMG OID641631895 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_001758804 
Protein GI170724778 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCG CTTGTGTCGC CACCCGTGCC AGCAAAGGCG TGGACGCTCC CTCCGTCACC 
GTTGAGGTTC ACCTGAGTAA CGGCCTTCCA GCATTCAATC TAGTAGGTTT GCCTGAAACC
TCTGTCAAAG AGGCCAAAGA GCGGGTGCGC AGCGCCATTA TTAATGCTGG CTTTGAGTTT
CCCATGCGCA GGATCACAGT CAACCTTGCC CCAGCCGATC TTCCTAAGCA GGGAGGTCGC
TATGATCTTC CGATAGCCAT CGGGATCTTG GTCGCTTCGA AGCAGATCCC TGAAAAAGCA
ATTAAGGATC ATGAATTCGT CGGAGAGCTT GCCCTCTCTG GACACATAAG ACAAAGCCAG
GGCTTACTGC CTGTTATTGT CGAGGCGCGT CAGCAAGGGA TCAACTTAGT GCTACCACTA
GAAAACCGAG CCGATGCTGA ACTTGTGGGT TATAACAGGG TATATTTTGC CTCCCACCTG
CAAGGATTAA GCGAATATCT TCATGGTCAG TCTCGACTCC CTGGTATCGA ATCAGGGCTT
GAATGGATTG AACATGAGAA AGAGGAGAGT CAGAGCTGTT TTAGCGAGGT GATTGGTCAA
TACCATGCAA AACATGGGTT AGAGATAGCC GCAGCTGGCA ACCATAACAT TCTGCTACTT
GGCCCACCAG GTACAGGGAA GAGTATGCTT GCCAGCCGTA TGATGCAACT GTTACCCCCT
CTTGGCTATG ATGAAGCCTT GGAGGTCGCA ACACTGCACT CTGTTGCCGG ACATCAGATC
CACCCTAATG CGTTTTACAC CCGCCCCTTT CGAAACCCAC ACCATACCAG CTCAGCCATC
TCACTCGTGG GTGGAGGCAG CGTTCCTAGG CCTGGCGAGA TCTCATTAGC CCACCGAGGG
GTGCTCTTCC TAGACGAAGT GGTTGAGTTC CCGCGCAAGG TGCTCGATTG TTTGCGAGAA
CCTATGGAGA CTGGTGAGGT AGTGATCTCC CGTGCAGCCG CTAAACTTAC TTTTTCCAGC
CGCTTCCAGC TAATCGCCGC CATGAATCCC AGCCCTTGTG GCGACTTGGA TAATGCCAGA
GCGACACCAG ATCAGATCCA GAGATATTTA TCTCGCTTAT CTGGCCCCTT TCTCGATAGG
TTTGATCTCA CCATTGAGGT TCCCAGACTT CCTGCTGGCG CCCTCACCCA AGAGAACAAG
AATGCAGAGA CCAGTTCAAC CATTGCACAA AGAGTAAAAC TTGCTAGAGA GCGACAACTC
AACCGAGCAG GGGTGCTCAA TAGTGAATTA AGCGGTAAAC AGCTCAAAGA TCTGGGAAGA
TTTAAGCAAG CAGATCTACT TTTTTTAGAG CAAAGTGTGA ATAAATTAAA CCTATCGATA
CGCAGCTTTC ATCGACTTCA GCGGGTATCT CGCACCATTG CAGATCTGCA ACAAAGTGAA
AACGTAGAGC GAAATCATAT CGCCCAGGCA TTGGGTTATC GGGCTATGGA TAGATTGTTA
AATAGTCTTA AAACTAGCTA TTAA
 
Protein sequence
MAIACVATRA SKGVDAPSVT VEVHLSNGLP AFNLVGLPET SVKEAKERVR SAIINAGFEF 
PMRRITVNLA PADLPKQGGR YDLPIAIGIL VASKQIPEKA IKDHEFVGEL ALSGHIRQSQ
GLLPVIVEAR QQGINLVLPL ENRADAELVG YNRVYFASHL QGLSEYLHGQ SRLPGIESGL
EWIEHEKEES QSCFSEVIGQ YHAKHGLEIA AAGNHNILLL GPPGTGKSML ASRMMQLLPP
LGYDEALEVA TLHSVAGHQI HPNAFYTRPF RNPHHTSSAI SLVGGGSVPR PGEISLAHRG
VLFLDEVVEF PRKVLDCLRE PMETGEVVIS RAAAKLTFSS RFQLIAAMNP SPCGDLDNAR
ATPDQIQRYL SRLSGPFLDR FDLTIEVPRL PAGALTQENK NAETSSTIAQ RVKLARERQL
NRAGVLNSEL SGKQLKDLGR FKQADLLFLE QSVNKLNLSI RSFHRLQRVS RTIADLQQSE
NVERNHIAQA LGYRAMDRLL NSLKTSY