Gene Swoo_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0408 
Symbol 
ID6114638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp503146 
End bp504069 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content45% 
IMG OID641631893 
Productputative acyltransferase 
Protein accessionYP_001758802 
Protein GI170724776 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAATT TTTTACCCGC TTCATTGCTG TACCTGATGA GTTCACTGCT TTTAGTCATT 
AATACCACGG TATGGGCAGG ATTAATTAGC ATAGGTGGCA TCATCAAACT GTTTGTGCCT
TTCACTGCTG GTCGCAATCT TCTTACTAAG ATAATGAACC GGTTCATGTG GGCTTGGGCG
ACTTGCAATG GCGGCATCCT CTATCTCCTT GCTGATATAG AGTGGGATAT TCAGGGGTTA
GAAAATTTAG ATAAAAATAG CTGGTACCTG CTTATCAGTA ACCACCTAAG TGGCTTCGAT
ATCGCCGTGC AGACCTATGT GCTGCGTAAC AATATCCCTA TGCTCAAGTT TTTCCTTAAG
CGTGAGCTGA TGTTTGTTCC ATTCTTAGGT TTAGGATGTT GGGCACTGGA TATGCCTTTT
ATGAGCCGCA CCAGCCCAGC GAAACTAAAA AAGAACCCCA AGCTTAAAGG GAAAGATCTT
ATCTCTACCC GCCGCGCCTG CGAAAAGTTT AAAACCATGC CTACCTCTAT CATTAACTAT
GTTGAGGGCA GTCGTTTTAC CGAGGAGAAG CGAGTCCGTC AGGACTCTCC CTACCGTTAT
CTATTAAGGC CTAAGGCGGG TGGTATCGCC TTTACTCTCT CAGCTATGGG AGAGCAGTTT
ACTCACCTTC TCAACTGTAC CTTAGTCTAT CCGGAAGCTC AGTCAGACCC ACTCTCTGAG
GTGATGCATG GAAAAATTAA GAAGATCATC GTCAAAATTG AGGTATTACC AGTCCCGCAA
GTTGACAATA AACGTTACTT TTCTGAAGCC CCTTATCGCG TCGAATTCCA GCGTTGGTTA
AACCAATTAT GGGAAGAGAA AGATGAGCAG ATCCATCAAG TGATGCTAGA GCACGGTGTT
GCCAAAGAGG ATAAGCCTGA GTAA
 
Protein sequence
MLNFLPASLL YLMSSLLLVI NTTVWAGLIS IGGIIKLFVP FTAGRNLLTK IMNRFMWAWA 
TCNGGILYLL ADIEWDIQGL ENLDKNSWYL LISNHLSGFD IAVQTYVLRN NIPMLKFFLK
RELMFVPFLG LGCWALDMPF MSRTSPAKLK KNPKLKGKDL ISTRRACEKF KTMPTSIINY
VEGSRFTEEK RVRQDSPYRY LLRPKAGGIA FTLSAMGEQF THLLNCTLVY PEAQSDPLSE
VMHGKIKKII VKIEVLPVPQ VDNKRYFSEA PYRVEFQRWL NQLWEEKDEQ IHQVMLEHGV
AKEDKPE