Gene Swoo_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0403 
Symbol 
ID6114633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp498661 
End bp499431 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content44% 
IMG OID641631888 
Producthypothetical protein 
Protein accessionYP_001758797 
Protein GI170724771 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTT TAGTTTTTTT ACTCATAATT TTTAGTTGGG ACTCCTATGG GGAGCAGAGC 
TTGGTTGATT TTAAAAAACA GAGCAAAACG ACTCAGCCAT ATATTATCGA GCTCTATACT
TCTCAAGGTT GCAGTAGTTG CCCACCTGCT GAAAGCTGGC TTTCTGGGTT TGTTGAGCGT
GATACCCTGT GGCAAGAGTA TTTTCCTCTG GCTTTCCATG TTACCTATTG GGATTACATT
GGTTGGAAAG ACCCCTTTGG TCAGCGTGGG TTTAGTCAGC GCCAATATGA TCATCTCAAT
GCTAAAAATA CTGGGCAGGT TTATACACCG CAATTTGTCA TTAATGGTGA AGAGTGGCGA
GGCTGGTTTG CTCGGGATCT GTTGCTTGGT TTTAATCGAC AGGAGCAGGA GGTCGGGGTG
TTGAAGGTGG CTGTTAACGA TAAAAAACTT AAGGCGAGCT TTTTGGCTGC TAAGAAGGTA
AAAAGTGACT CGCTAAAGTT ACATATGGCG TTGGTAGGTA TAGGGTTGAA CACGTACGTT
AGAAAGGGGG AGAATCGTAA CGTTCGTTTG TTGCATAATT TTACCGTGCT AGAACATCAG
ATTTTTGAAC CTAGCGGCCT TACAGCTGGT GGAGATGAAC TGCTTTTTTC TGGTGATGTT
GCGAATTTTA ATATGCAAAA AGGCAGTCCA GAGAGTTTGG CTCTGGTAGC TTGGGTAGAG
CAAGAGGGAA AAGCGATTCA AGCCGTGGGA GATTGGTTAT CAGCTAAGTA G
 
Protein sequence
MRFLVFLLII FSWDSYGEQS LVDFKKQSKT TQPYIIELYT SQGCSSCPPA ESWLSGFVER 
DTLWQEYFPL AFHVTYWDYI GWKDPFGQRG FSQRQYDHLN AKNTGQVYTP QFVINGEEWR
GWFARDLLLG FNRQEQEVGV LKVAVNDKKL KASFLAAKKV KSDSLKLHMA LVGIGLNTYV
RKGENRNVRL LHNFTVLEHQ IFEPSGLTAG GDELLFSGDV ANFNMQKGSP ESLALVAWVE
QEGKAIQAVG DWLSAK