| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0384 |
|---|
| Symbol | |
|---|
| ID | 6114614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 481638 |
|---|
| End bp | 482579 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641631869 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_001758778 |
|---|
| Protein GI | 170724752 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAT CAGTACGCCA ATCAGTTATG CAAGCGAGCC GTGAGTGGAT AGCGAATTTT
AACCAAGGTA ATGTGCAGGC CTGTACAGAG CGTTACCAAA AAGAGGCGAC CATGCAGGTC
TCTCCATTTG GTCGCTTCAA CGGCATGGAG GCGATAGCAG GATTTTGGAA TGAGTTTGCC
AAAAGCGGCC CAACTAAACT GGTTTACCGC AATGTAGAGA TTAAAGTGCT TAACGATAAA
CAAGCTATCT TGTCTGCCAA CTGGTCAATG AATATTGCTA GTGGCTTTAT CAGCAAGGAG
TTATGGACAC TAAATGATGA TGGTCAGTGG TACTTAGAGG AGGATGACTT TAGTGTACTG
ACTCAGCACC CTGCTCCACT TGATGATGAC AAGCGTACCG CTCTGGTACT TGTCGACCTA
CAAAACGACT ACTTCTCAGG AGGTCGTTTC CCACTGGATA ACACAGACAT TGCCACCCAA
CATGCGAAAA CTTTACTGTC ACATTTTAGA AAAAATGCGC TGCCCGTGAT CCATATTCAG
CATATTTTTG AAGATGACAA TGCCCCCTTC TTTACCGCCA ATACCACGGG TATAGAGATT
GAAACAAGCG TGGCACCCTT GGCCGAGGAG CCTGTTGTAA TCAAGCATCA GATAGACAGT
TTTATCGATA CCTCTCTTGA ACAGAGCTTA GTTGAGTTAG GAGTTGATAA GCTAGTGATA
GTCGGCGCCA TGGCACAAGC TTGTGTGCAA ACCATCACAC GCAGTGCGGT AAACAAGGGC
TATAGTTGCG AGGTGATAAG CGATGCTATT GCTGCACCAT CTCTGCCTTA CGGTGAGCAT
AAGTTCAGTG GAGATCAGTT AGTTGCCGCG AATCTATTAT CTCTCTCATT TGGCGGCGCA
AAAGCCACCA CATCGACTCA ATGGTTAAAG GACAACGCAT AA
|
|---|
| Protein sequence | MSQSVRQSVM QASREWIANF NQGNVQACTE RYQKEATMQV SPFGRFNGME AIAGFWNEFA
KSGPTKLVYR NVEIKVLNDK QAILSANWSM NIASGFISKE LWTLNDDGQW YLEEDDFSVL
TQHPAPLDDD KRTALVLVDL QNDYFSGGRF PLDNTDIATQ HAKTLLSHFR KNALPVIHIQ
HIFEDDNAPF FTANTTGIEI ETSVAPLAEE PVVIKHQIDS FIDTSLEQSL VELGVDKLVI
VGAMAQACVQ TITRSAVNKG YSCEVISDAI AAPSLPYGEH KFSGDQLVAA NLLSLSFGGA
KATTSTQWLK DNA
|
|---|
| |