Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0380 |
Symbol | |
ID | 6114610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 476846 |
End bp | 478066 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631865 |
Product | hypothetical protein |
Protein accession | YP_001758774 |
Protein GI | 170724748 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACACTC AGGATTTTTT AGTAAAGCGT CGCTTTATCA TAAAGTTAGG AAAGTATCTC CATAAGTTTG GCACCCCAGC TTATCGACTA GAAGCTCATC TTCAAGCGGT CTCTAACTTT CTCGGTTTAG AGGGCTATTT TCTCATCTCT CCCACTGCGA TGACATTTGT GCTTCAGCGT GACGACGAGC AGGAATATAA CCATGTCGCG AGGGTTAAGC CTGGCGAGCT TGATCTGGGC TCTTTGGCAA GAACCGATGA GCTGGTTGAG GAGTTGGTAT CAGGTAAGAG AACCCTTGAT GAAGCCTTAG ATCGCCTCGA TGAGATAGCC AATAAACCTA ACCCCTATGG TTCGCTACTA ACGCTATTGG CATTTGGTAG TTCAGCAGGG GCTTTCGCCA TGCTGATGGG TACCAGTTGG AATGATGTTT TCTGGTCAGC GACGTTAGGT TTTATGGTCT ATGGTCTGGT TTATCGCGCC GAACGCTCCA AGCGTATGGC GGAGATGCTT GAACCTCTAG CCGCCATCTT AGCCGCCATC ATCACCTGTG GGATCTCACA GTTCGATCCC AGCATCAACA TTCCTGTGGT GATCCTCTCC GGCATAATTG TCTTTGTGCC CGGCTTAGCA CTCACCTTAG GTTTAGCTGA GTTAGCGGCA AGGGATCTTA TCTCAGGTAC AGCGCGCATT ATGGATGCCT GTATGCTGCT ATTTAAACTC TATTTCGGCG CTATTTTTGG TATGGTTGTC GGTACCGCTA TTTTTGGCGA GGCGATCTAC TTTGAACCTG AACCTCTACC TCAGATAGCC GTTTGGTCAG CTGTACCCAT CTTATCCATG GCGCTGGTGA TCATCTTTAA AGCCCGCATG AAGGATTCAC CCTGGGGAAT ATTGGCAGGT ATTGTCGCCT TCTGCTCATC CATGCTCGGT GCAATCTATC TCGGTGAGTC TATCGGGATC TTTTTTGGTG CCTTTGCAGT AGGTGTTTAC TCCAACCTCT TTGCTCGTTG GATGAAAGCC CCCGCCTCTA TCGCACTACT TCAAGGCATA GTGATCTTAG TCCCAGGCAG TAAAACTTAT ATCGGGCTAA ACACCCTTAT CTTGGGTGAA ACCATGCTGA ATCAGTCCCA TATTGGTACT CAGATATTCC TGATATTTAT GTCTCTTGTT GCAGGGTTAA TCTTTGCAAA CGTTGCCGTT TCTCCCAGAA GAACTCTCTA G
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Protein sequence | MDTQDFLVKR RFIIKLGKYL HKFGTPAYRL EAHLQAVSNF LGLEGYFLIS PTAMTFVLQR DDEQEYNHVA RVKPGELDLG SLARTDELVE ELVSGKRTLD EALDRLDEIA NKPNPYGSLL TLLAFGSSAG AFAMLMGTSW NDVFWSATLG FMVYGLVYRA ERSKRMAEML EPLAAILAAI ITCGISQFDP SINIPVVILS GIIVFVPGLA LTLGLAELAA RDLISGTARI MDACMLLFKL YFGAIFGMVV GTAIFGEAIY FEPEPLPQIA VWSAVPILSM ALVIIFKARM KDSPWGILAG IVAFCSSMLG AIYLGESIGI FFGAFAVGVY SNLFARWMKA PASIALLQGI VILVPGSKTY IGLNTLILGE TMLNQSHIGT QIFLIFMSLV AGLIFANVAV SPRRTL
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