Gene Swoo_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0380 
Symbol 
ID6114610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp476846 
End bp478066 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content48% 
IMG OID641631865 
Producthypothetical protein 
Protein accessionYP_001758774 
Protein GI170724748 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACTC AGGATTTTTT AGTAAAGCGT CGCTTTATCA TAAAGTTAGG AAAGTATCTC 
CATAAGTTTG GCACCCCAGC TTATCGACTA GAAGCTCATC TTCAAGCGGT CTCTAACTTT
CTCGGTTTAG AGGGCTATTT TCTCATCTCT CCCACTGCGA TGACATTTGT GCTTCAGCGT
GACGACGAGC AGGAATATAA CCATGTCGCG AGGGTTAAGC CTGGCGAGCT TGATCTGGGC
TCTTTGGCAA GAACCGATGA GCTGGTTGAG GAGTTGGTAT CAGGTAAGAG AACCCTTGAT
GAAGCCTTAG ATCGCCTCGA TGAGATAGCC AATAAACCTA ACCCCTATGG TTCGCTACTA
ACGCTATTGG CATTTGGTAG TTCAGCAGGG GCTTTCGCCA TGCTGATGGG TACCAGTTGG
AATGATGTTT TCTGGTCAGC GACGTTAGGT TTTATGGTCT ATGGTCTGGT TTATCGCGCC
GAACGCTCCA AGCGTATGGC GGAGATGCTT GAACCTCTAG CCGCCATCTT AGCCGCCATC
ATCACCTGTG GGATCTCACA GTTCGATCCC AGCATCAACA TTCCTGTGGT GATCCTCTCC
GGCATAATTG TCTTTGTGCC CGGCTTAGCA CTCACCTTAG GTTTAGCTGA GTTAGCGGCA
AGGGATCTTA TCTCAGGTAC AGCGCGCATT ATGGATGCCT GTATGCTGCT ATTTAAACTC
TATTTCGGCG CTATTTTTGG TATGGTTGTC GGTACCGCTA TTTTTGGCGA GGCGATCTAC
TTTGAACCTG AACCTCTACC TCAGATAGCC GTTTGGTCAG CTGTACCCAT CTTATCCATG
GCGCTGGTGA TCATCTTTAA AGCCCGCATG AAGGATTCAC CCTGGGGAAT ATTGGCAGGT
ATTGTCGCCT TCTGCTCATC CATGCTCGGT GCAATCTATC TCGGTGAGTC TATCGGGATC
TTTTTTGGTG CCTTTGCAGT AGGTGTTTAC TCCAACCTCT TTGCTCGTTG GATGAAAGCC
CCCGCCTCTA TCGCACTACT TCAAGGCATA GTGATCTTAG TCCCAGGCAG TAAAACTTAT
ATCGGGCTAA ACACCCTTAT CTTGGGTGAA ACCATGCTGA ATCAGTCCCA TATTGGTACT
CAGATATTCC TGATATTTAT GTCTCTTGTT GCAGGGTTAA TCTTTGCAAA CGTTGCCGTT
TCTCCCAGAA GAACTCTCTA G
 
Protein sequence
MDTQDFLVKR RFIIKLGKYL HKFGTPAYRL EAHLQAVSNF LGLEGYFLIS PTAMTFVLQR 
DDEQEYNHVA RVKPGELDLG SLARTDELVE ELVSGKRTLD EALDRLDEIA NKPNPYGSLL
TLLAFGSSAG AFAMLMGTSW NDVFWSATLG FMVYGLVYRA ERSKRMAEML EPLAAILAAI
ITCGISQFDP SINIPVVILS GIIVFVPGLA LTLGLAELAA RDLISGTARI MDACMLLFKL
YFGAIFGMVV GTAIFGEAIY FEPEPLPQIA VWSAVPILSM ALVIIFKARM KDSPWGILAG
IVAFCSSMLG AIYLGESIGI FFGAFAVGVY SNLFARWMKA PASIALLQGI VILVPGSKTY
IGLNTLILGE TMLNQSHIGT QIFLIFMSLV AGLIFANVAV SPRRTL